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CAZyme Information: MGYG000001492_00824

You are here: Home > Sequence: MGYG000001492_00824

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterococcus_C massiliensis
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus_C; Enterococcus_C massiliensis
CAZyme ID MGYG000001492_00824
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
640 MGYG000001492_5|CGC3 74710.12 5.9706
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001492 2712841 Isolate not provided not provided
Gene Location Start: 217172;  End: 219094  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001492_00824.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL12 345 480 2.2e-40 0.9851851851851852

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 9.04e-18 344 551 11 223
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16889 Hepar_II_III_N 1.45e-15 69 300 89 329
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOG29927.1 1.61e-205 1 637 1 629
QGR82240.1 2.28e-205 1 637 1 629
QCX17616.1 9.51e-205 1 637 1 630
QZN88141.1 9.70e-197 1 636 1 628
APF21849.1 1.01e-152 38 640 39 654

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MMH_A 2.12e-10 71 418 104 453
Crystalstructure of heparan sulfate lyase HepC from Pedobacter heparinus [Pedobacter heparinus]
4MMI_A 2.12e-10 71 418 104 453
Crystalstructure of heparan sulfate lyase HepC mutant from Pedobacter heparinus [Pedobacter heparinus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q59289 1.18e-09 71 418 128 477
Heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001492_00824.