CAZyme Information: MGYG000001489_00904

Basic Information

• Species: Parabacteroides goldsteinii
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides goldsteinii
• CAZyme ID: MGYG000001489_00904
• CAZy Family: GH141
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
694	MGYG000001489_1|CGC23	79048.15	6.8616

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001489	6453137	Isolate	not provided	not provided

• Gene Location: Start: 1134305; End: 1136389 Strand: +

Full Sequence      

MKRHLFLYLLSVCSSAIIAQNTIYVSPGTTGIQKGTYESPYGTIEEALKQGLNTTGLDTV
HIRIQSGFYPLNQTLRIDKSPSVPVVIEGEGKDKPVISGAITLTSWEKTPEGWWKTHVDE
VARYGLKIEQLYVNGNRATRARTPDTGWFFVEKADETIHYKGTGRSPEYATQRIQAKPED
MASLQGLSEEELNEVMVMCYHKWDNTRKYLSMAIPDSGYFFLNGQGMKPWNPIQKGSRFI
LENYKQAMTAEGEWFMEPSGDLYYIPRKGEIIETSIAHAPVLNRLLTIKGEKGYPVKNVT
FRNLSFEHSGYVMPKTGNNPAQAASPVDAAIHLDFADNIRFENCEIKHTGNYAIWFRKAC
TNCNLEHSYLTDLGAGAVKIGEYETPDPNLLTKKITVDNNIIQKTGFVFPCGVGVAIFNS
SDNKVTHNEISDLLYSGVSVGWVWGYGKSYAVNNEIAYNNIHHIGWGELSDMGAVYTLGI
SPGTRIHNNVIHHIYSYDYGGWGLYTDEGSTGVVMENNLVYGCKSGGFHQHYGEKNSIRN
NIFAFNHHQQLQFTRVEEHQSFSFTSNIILMDHGVYLSGPWDKANIDMDYNCYWDLRNNM
PPKFLDNDWKAWKGIKDKHSIIQDPAFKDPYRLDFHFKNQKAIRKIRFKPFDYEKAGVYG
SDEWIQKARLPKEREDEFDRIVREREKSVSALFE

Enzyme Prediction     

No EC number prediction in MGYG000001489_00904.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH141	22	521	2.7e-95	0.9905123339658444

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	7.63e-14	329	541	1	156	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	6.74e-11	414	579	2	146	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	1.60e-10	294	490	6	157	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05048	NosD	6.35e-06	397	546	1	175	Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.
pfam13229	Beta_helix	4.76e-04	483	591	10	108	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGA25764.1	1.70e-221	8	682	8	686
AWO00314.1	3.86e-221	23	692	37	707
QEC52583.1	2.16e-209	6	686	10	723
SCM58138.1	3.27e-208	8	678	8	697
EAR00018.1	2.38e-207	1	684	1	695

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQP_A	6.88e-38	17	524	21	586	Glycosidehydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_B Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_C Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_D Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_E Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_F Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_G Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_H Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000716	0.996274	0.002402	0.000200	0.000193	0.000186

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001489_00904.