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CAZyme Information: MGYG000001485_02382
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pseudomonas_E massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E massiliensis | |||||||||||
| CAZyme ID | MGYG000001485_02382 | |||||||||||
| CAZy Family | GH16 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 223450; End: 229071 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00736 | CADG | 1.99e-28 | 956 | 1051 | 1 | 96 | Dystroglycan-type cadherin-like domains. Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions. |
| smart00736 | CADG | 7.55e-25 | 698 | 792 | 3 | 97 | Dystroglycan-type cadherin-like domains. Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions. |
| NF035945 | Zn_serralysin | 1.34e-16 | 1069 | 1154 | 323 | 401 | serralysin family metalloprotease. |
| pfam05345 | He_PIG | 1.83e-16 | 953 | 1047 | 1 | 95 | Putative Ig domain. This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei. |
| pfam08548 | Peptidase_M10_C | 4.39e-16 | 1069 | 1146 | 90 | 160 | Peptidase M10 serralysin C terminal. Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QXI50735.1 | 0.0 | 1 | 1873 | 1 | 1870 |
| QXH92242.1 | 0.0 | 1 | 1873 | 1 | 1870 |
| QXH59437.1 | 0.0 | 1 | 1873 | 1 | 1871 |
| BBP53225.1 | 0.0 | 1 | 1853 | 1 | 1850 |
| QZP31465.1 | 0.0 | 1 | 1873 | 1 | 1872 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5LW3_A | 1.84e-110 | 1 | 379 | 1 | 377 | Azotobactervinelandii Mannuronan C-5 epimerase AlgE6 A-module [Azotobacter vinelandii] |
| 2PYG_A | 1.79e-105 | 1 | 377 | 1 | 375 | Azotobactervinelandii Mannuronan C-5 epimerase AlgE4 A-module [Azotobacter vinelandii],2PYG_B Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module [Azotobacter vinelandii],2PYH_A Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide [Azotobacter vinelandii],2PYH_B Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide [Azotobacter vinelandii] |
| 2AGM_A | 8.62e-27 | 850 | 944 | 52 | 146 | Solutionstructure of the R-module from AlgE4 [Azotobacter vinelandii] |
| 2ML1_A | 7.11e-24 | 857 | 947 | 62 | 152 | SolutionStructure of AlgE6R1 subunit from the Azotobacter vinelandii Mannuronan C5-epimerase [Azotobacter vinelandii] |
| 2ML2_A | 2.03e-20 | 850 | 947 | 63 | 160 | SolutionStructure of AlgE6R2 subunit from the Azotobacter vinelandii Mannuronan C5-epimerase [Azotobacter vinelandii] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q44492 | 8.44e-203 | 1 | 1207 | 1 | 978 | Mannuronan C5-epimerase AlgE5 OS=Azotobacter vinelandii OX=354 GN=algE5 PE=2 SV=1 |
| Q44495 | 1.37e-196 | 1 | 1207 | 1 | 978 | Mannuronan C5-epimerase AlgE2 OS=Azotobacter vinelandii OX=354 GN=algE2 PE=1 SV=1 |
| Q44496 | 1.05e-181 | 2 | 1207 | 844 | 1820 | Mannuronan C5-epimerase AlgE3 OS=Azotobacter vinelandii OX=354 GN=algE3 PE=3 SV=1 |
| Q44494 | 9.31e-176 | 1 | 942 | 1 | 842 | Mannuronan C5-epimerase AlgE1 OS=Azotobacter vinelandii OX=354 GN=algE1 PE=1 SV=1 |
| Q9ZFH0 | 4.02e-162 | 1 | 944 | 1 | 851 | Mannuronan C5-epimerase AlgE6 OS=Azotobacter vinelandii OX=354 GN=algE6 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000057 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |