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CAZyme Information: MGYG000001485_00595

You are here: Home > Sequence: MGYG000001485_00595

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudomonas_E massiliensis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E massiliensis
CAZyme ID MGYG000001485_00595
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
425 MGYG000001485_4|CGC6 46710.41 6.971
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001485 4723534 Isolate not provided not provided
Gene Location Start: 360389;  End: 361666  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001485_00595.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 117 333 3.5e-33 0.531322505800464

CDD Domains      help

MGYG000001485_00595 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIS19220.1 7.17e-134 26 383 23 374
QFU12028.1 2.50e-120 30 383 32 378
QQN51083.1 3.88e-120 22 390 18 379
QIJ00692.1 3.88e-120 22 390 18 379
AGA87124.1 9.12e-120 16 392 11 387

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 1.06e-35 49 385 122 460
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]
6UQJ_A 3.39e-11 120 409 136 428
Crystalstructure of the GH39 enzyme from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]
4EKJ_A 2.23e-08 54 330 53 355
ChainA, Beta-xylosidase [Caulobacter vibrioides]
4M29_A 2.23e-08 54 330 53 355
Structureof a GH39 Beta-xylosidase from Caulobacter crescentus [Caulobacter vibrioides CB15]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000477 0.998633 0.000238 0.000206 0.000195 0.000186

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001485_00595.