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CAZyme Information: MGYG000001480_01424

You are here: Home > Sequence: MGYG000001480_01424

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pauljensenia polynesiensis
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Pauljensenia; Pauljensenia polynesiensis
CAZyme ID MGYG000001480_01424
CAZy Family PL42
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
742 79918.82 4.1811
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001480 2878449 Isolate not provided not provided
Gene Location Start: 12464;  End: 14692  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001480_01424.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL42 332 628 1.4e-85 0.9898648648648649

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam15892 BNR_4 4.74e-61 351 611 1 268
BNR repeat-containing family member. BNR_4 is a family which carries the unique sequence motif SxDxGxTW which is so characteristic of the repeats of the BNR family, pfam02012. It is unclear whether or not this unit is repeated throughout the sequences of this family, but if it is then the family is likely to be bacterial neuraminidase.
COG2931 COG2931 0.002 50 329 33 312
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism].
pfam13517 VCBS 0.002 82 134 1 57
Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZN29787.1 1.59e-144 277 735 257 718
QDB80652.1 1.16e-135 309 742 85 519
AGA76772.1 7.34e-116 315 730 24 435
AXY77893.1 1.62e-115 320 728 33 436
QOY95028.1 1.30e-114 322 717 40 430

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MUM_A 4.50e-102 322 730 31 430
GlycosideHydrolase BACINT_00347 [Bacteroides intestinalis DSM 17393]
5MUK_A 3.36e-101 322 728 26 423
GlycosideHydrolase BT3686 [Bacteroides thetaiotaomicron VPI-5482],5MUL_A Glycoside Hydrolase BT3686 bound to Glucuronic Acid [Bacteroides thetaiotaomicron VPI-5482]
5MVH_A 6.64e-101 322 730 26 425
GlycosideHydrolase BACCELL_00856 [Bacteroides cellulosilyticus DSM 14838]
4IRT_A 1.48e-96 322 728 9 406
Crystalstructure of a putative neuraminidase (BACOVA_03493) from Bacteroides ovatus ATCC 8483 at 1.74 A resolution [Bacteroides ovatus ATCC 8483]
7ESK_A 3.19e-17 350 708 46 403
ChainA, L-Rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum],7ESM_A Chain A, L-rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000030 0.000007 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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