CAZyme Information: MGYG000001479_02803

Basic Information

• Species: Clostridium_AA polynesiense
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_AA; Clostridium_AA polynesiense
• CAZyme ID: MGYG000001479_02803
• CAZy Family: GH0
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
525		59890.68	4.6418

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001479	3560738	Isolate	not provided	not provided

• Gene Location: Start: 13611; End: 15188 Strand: -

Full Sequence      

MAVGRLRVQVLEEDTFIPIPNTRVTIIPRGENIPQIVRQQQVTNSVGQTEAVELPAPPIE
FSQSPSSEIPYSFADVQVEADGYLPLIVRGVQIFPELTAIQVCNLISTRKGEMRGIKSQE
INIKPHRMVEDFKEMQRQQEVIYIQENTLVGNFPPKIPEDEEKPLPPEKGVVVLENVVVP
EFVVVHDGRPEDNNAPNYTVRYKDYIKNVACCEIFSTWPENSIRANIYCIISFTLNRIYT
EWYRNKGKDFTITTSTAFDQAFSFGRNIYENINRIVDDIFSTYIKRPEAKQPLFAQYCDG
VRVQCPGWLTQWGSKYLADQGRTPYEILTNFYGTNLELRRAPEVEGIPISYPGTVLSIGS
RGNDVRNIQTYLNRISQNYPLIPKVAVDGVYGPATANSVKVFQQVFGLPETGNVDYATWY
EISQIFVGVSKLAELRAVNMDELNFTLTRSSDWENLNSQEETEETPIEENNQKADSKKED
VESEGPYVAASRKVKSTRRIFFPPLTYEMYYRNDIPKVGYMDDGL

Enzyme Prediction     

No EC number prediction in MGYG000001479_02803.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01471	PG_binding_1	1.85e-14	361	419	1	54	Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409	PGRP	3.29e-10	309	419	1	99	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409	PGRP	4.23e-06	340	424	105	185	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVP53887.1	1.81e-194	1	449	1	427
QBD85672.1	1.81e-194	1	449	1	427
SNV87153.1	8.42e-194	1	436	1	413
VTQ95559.1	9.20e-184	1	436	1	415
QAA30635.1	1.14e-183	4	523	5	450

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000063	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001479_02803.