CAZyme Information: MGYG000001456.1_02038

Basic Information

• Species: Eubacterium_I ramulus
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_I; Eubacterium_I ramulus
• CAZyme ID: MGYG000001456.1_02038
• CAZy Family: GH0
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
423	MGYG000001456.1_79|CGC1	47566.23	4.462

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001456.1	3435082	Isolate	not provided	not provided

• Gene Location: Start: 5534; End: 6805 Strand: -

Full Sequence      

MPDKGLHVQQNENVDRGRLQVNVTSTLGLQPVVNARVGIAYTGESQRVLEELQTDSSGQT
EAVTLDAPPIEYSQEPDRPQPFSEYTVTVQAEGYRSVEVSAIDVFANVTALQEIRMEPLD
ISQKEGTENIVVPPNTLWGDFPPKIPEDEVKPVNESGEIVLSRVVIPEYVIVHDGPPTDT
RAQDYYVRYRDYIKNVASSEIYSTWPEATLRANILAIMSFSLNRVYTEWYRGKGYDFTIT
SSTAYDQKWSFGRTIFSNISRIVDEIFNHYLSRPNVQQPILTQYCDGKNVTCSGWMTQWG
SRYLGEQGYSPIEILRYYYGSSIYINSAEEIAGIPSSWPGADLTVGSSGTKVRQIQQQLA
RISQAYPAIPTIAADGIFGERTREAVEAFQRIFDLPVSGVVDFPTWYKISQIYVGVTRIA
ELN

Enzyme Prediction     

No EC number prediction in MGYG000001456.1_02038.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01471	PG_binding_1	2.46e-13	348	409	1	57	Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409	PGRP	1.23e-09	339	411	117	185	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409	PGRP	3.35e-09	343	409	39	102	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
TIGR02669	SpoIID_LytB	1.98e-07	181	319	106	260	SpoIID/LytB domain. This model describes a domain found typically in two or three proteins per genome in Cyanobacteria and Firmicutes, and sporadically in other genomes. One member is SpoIID of Bacillus subtilis. Another in B. subtilis is the C-terminal half of LytB, encoded immediately upstream of an amidase, the autolysin LytC, to which its N-terminus is homologous. Gene neighborhoods are not well conserved for members of this family, as many, such as SpoIID, are monocistronic. One early modelling-based study suggests a DNA-binding role for SpoIID, but the function of this domain is unknown. [Unknown function, General]
pfam13620	CarboxypepD_reg	0.002	23	116	6	81	Carboxypeptidase regulatory-like domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
VCV21206.1	1.82e-208	13	422	10	418
QEI32542.1	5.91e-198	10	423	17	430
QHB25032.1	5.91e-198	10	423	17	430
QRT31086.1	9.01e-198	10	423	19	432
AWY98201.1	9.45e-195	6	422	6	420

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000061	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001456.1_02038.