dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001451_05134

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Basic Information help

Species

Paenibacillus_A antibioticophila

Lineage

Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A antibioticophila

CAZyme ID

MGYG000001451_05134

CAZy Family

GH18

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
432	MGYG000001451_8\|CGC1	46245.5	5.148

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001451	5573040	Isolate	not provided	not provided

Gene Location

Start: 46918; End: 48216 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000001451_05134.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH18	224	387	1.9e-19	0.48986486486486486

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd02874	GH18_CFLE_spore_hydrolase	1.35e-37	164	424	4	313	Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
pfam07833	Cu_amine_oxidN1	2.09e-31	59	155	1	93	Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.
COG3858	YaaH	6.24e-21	158	425	98	419	Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
pfam00704	Glyco_hydro_18	2.42e-11	245	420	81	262	Glycosyl hydrolases family 18.
smart00636	Glyco_18	2.95e-10	244	386	83	236	Glyco_18 domain.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AZK45466.1	6.59e-178	41	432	34	420
AZS18060.1	4.28e-173	11	432	7	417
QWU17984.1	2.95e-158	11	429	7	412
AIQ12315.1	1.19e-157	11	429	7	412
AJS58116.1	3.28e-157	11	429	9	413

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4S3K_A	1.72e-12	231	386	170	327	ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P37531	2.19e-11	242	386	181	323	Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.002636	0.917906	0.002913	0.075563	0.000673	0.000291

TMHMM Annotations download full data without filtering help

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