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CAZyme Information: MGYG000001448_02134

You are here: Home > Sequence: MGYG000001448_02134

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dermabacter hominis
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Dermabacteraceae; Dermabacter; Dermabacter hominis
CAZyme ID MGYG000001448_02134
CAZy Family GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
679 MGYG000001448_1|CGC22 73027.47 7.4734
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001448 2361290 Isolate not provided not provided
Gene Location Start: 2313177;  End: 2315216  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001448_02134.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT2 363 467 1.7e-23 0.611764705882353

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd04185 GT_2_like_b 6.58e-63 363 593 1 201
Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
COG1216 GT2 2.88e-31 360 604 4 254
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism].
COG0451 WcaG 3.88e-24 14 331 4 311
Nucleoside-diphosphate-sugar epimerase [Cell wall/membrane/envelope biogenesis].
pfam01370 Epimerase 1.00e-21 14 232 2 237
NAD dependent epimerase/dehydratase family. This family of proteins utilize NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions.
pfam00535 Glycos_transf_2 6.14e-21 364 463 3 101
Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATH96274.1 0.0 1 679 29 707
QEU11522.1 0.0 1 679 8 685
ANP28075.1 0.0 13 679 3 668
AXK45537.1 9.30e-127 344 665 12 330
ATG51559.1 2.62e-126 344 665 12 330

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2P5U_A 1.92e-10 12 176 2 176
Crystalstructure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD [Thermus thermophilus HB8],2P5U_B Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD [Thermus thermophilus HB8],2P5U_C Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD [Thermus thermophilus HB8],2P5U_D Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD [Thermus thermophilus HB8],2P5Y_A Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD [Thermus thermophilus HB8]
3AW9_A 2.51e-10 12 176 2 166
Structureof UDP-galactose 4-epimerase mutant [Pyrobaculum calidifontis JCM 11548],3AW9_B Structure of UDP-galactose 4-epimerase mutant [Pyrobaculum calidifontis JCM 11548],3AW9_C Structure of UDP-galactose 4-epimerase mutant [Pyrobaculum calidifontis JCM 11548]
6WJB_A 1.45e-09 12 176 5 179
UDP-GlcNAcC4-epimerase from Pseudomonas protegens in complex with NAD and UDP-GlcNAc [Pseudomonas protegens Pf-5],6WJB_B UDP-GlcNAc C4-epimerase from Pseudomonas protegens in complex with NAD and UDP-GlcNAc [Pseudomonas protegens Pf-5]
6WJ9_A 4.62e-09 12 176 5 179
UDP-GlcNAcC4-epimerase mutant S121A/Y146F from Pseudomonas protegens in complex with UDP-GlcNAc [Pseudomonas protegens Pf-5],6WJ9_B UDP-GlcNAc C4-epimerase mutant S121A/Y146F from Pseudomonas protegens in complex with UDP-GlcNAc [Pseudomonas protegens Pf-5],6WJA_A UDP-GlcNAc C4-epimerase mutant S121A/Y146F from Pseudomonas protegens in complex with UDP-GalNAc [Pseudomonas protegens Pf-5],6WJA_B UDP-GlcNAc C4-epimerase mutant S121A/Y146F from Pseudomonas protegens in complex with UDP-GalNAc [Pseudomonas protegens Pf-5]
3ICP_A 2.64e-08 12 176 2 170
CrystalStructure of UDP-galactose 4-epimerase [Pyrobaculum calidifontis JCM 11548],3KO8_A Crystal Structure of UDP-galactose 4-epimerase [Pyrobaculum calidifontis JCM 11548]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0R5Z2 1.83e-14 361 638 7 287
Galactofuranosyltransferase GlfT1 OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=glfT1 PE=1 SV=1
P9WMX2 1.17e-12 361 623 5 276
Galactofuranosyltransferase GlfT1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=glfT1 PE=3 SV=1
P9WMX3 1.17e-12 361 623 5 276
Galactofuranosyltransferase GlfT1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=glfT1 PE=1 SV=1
Q8X7P7 1.59e-11 14 263 6 252
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase OS=Escherichia coli O157:H7 OX=83334 GN=gnu PE=1 SV=1
E5F146 1.98e-06 10 234 8 241
dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD(P)(+)) OS=Kitasatospora kifunensis OX=58351 GN=tal PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000075 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001448_02134.