CAZyme Information: MGYG000001445_01097

Basic Information

• Species: Cedecea davisae
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Cedecea; Cedecea davisae
• CAZyme ID: MGYG000001445_01097
• CAZy Family: GH23
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
165		18741.48	10.1107

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001445	4852695	Isolate	not provided	not provided

• Gene Location: Start: 1149004; End: 1149501 Strand: -

Full Sequence      

MQTKSWRLGLLLLSLPALAQADCFKKVGNAFGISPALLEAIAWKESRFNLSAVNAANANR
TEDVCMMQVNSVHFGRLKQLGVTREGLLHDPCTCIATGAWVLHSLFRQHGRSWDTVGMYN
TGPSEKRRQLRQRYADEVHKIYNTLQKQQPRREQDLFASNETIKQ

Enzyme Prediction     

No EC number prediction in MGYG000001445_01097.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH23	34	149	6.8e-20	0.837037037037037

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd13400	LT_IagB-like	1.83e-48	31	143	1	108	Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.
PRK15328	PRK15328	9.22e-33	22	151	20	153	type III secretion system invasion protein IagB.
PRK13722	PRK13722	2.22e-26	22	152	21	152	lytic transglycosylase; Provisional
pfam01464	SLT	4.51e-23	24	135	1	108	Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
COG0741	MltE	1.66e-10	22	132	141	250	Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIX94563.1	1.82e-117	1	165	8	172
VEB99391.1	2.93e-99	1	165	1	166
AIR61384.1	9.78e-98	1	164	1	165
AIR04138.1	2.80e-97	1	165	1	166
AJZ90432.1	5.66e-97	1	160	1	161

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4XP8_A	6.57e-14	22	104	2	84	Structureof EtgA D60N mutant [Escherichia coli]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q07568	5.83e-30	10	142	7	138	Protein IpgF OS=Shigella flexneri OX=623 GN=ipgF PE=3 SV=1
Q55287	4.67e-29	10	142	7	138	Protein IpgF OS=Shigella sonnei OX=624 GN=ipgF PE=3 SV=1
P17738	8.33e-28	4	142	2	142	X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1
P14499	1.66e-27	4	142	2	142	X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1
P47737	1.32e-26	4	142	2	142	X polypeptide OS=Escherichia coli (strain K12) OX=83333 GN=yubQ PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000283	0.999025	0.000204	0.000161	0.000145	0.000134

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001445_01097.