logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001420_03028

You are here: Home > Sequence: MGYG000001420_03028

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes senegalensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes senegalensis
CAZyme ID MGYG000001420_03028
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
757 MGYG000001420_2|CGC18 82473.93 4.5826
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001420 3985129 Isolate not provided not provided
Gene Location Start: 1584717;  End: 1586990  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001420_03028.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 450 736 5.5e-35 0.7476923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.49e-10 488 671 246 434
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.29e-04 487 584 92 198
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AFL77442.1 0.0 1 757 1 757
CBK63844.1 8.28e-288 290 757 14 479
AFL77441.1 4.21e-285 290 757 31 496
QQA09746.1 7.78e-83 301 757 54 506
QQT79215.1 7.78e-83 301 757 54 506

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000029 0.027789 0.972188 0.000009 0.000012 0.000011

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001420_03028.