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CAZyme Information: MGYG000001420_01612

You are here: Home > Sequence: MGYG000001420_01612

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes senegalensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes senegalensis
CAZyme ID MGYG000001420_01612
CAZy Family GH163
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1049 MGYG000001420_1|CGC25 116608.12 7.2389
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001420 3985129 Isolate not provided not provided
Gene Location Start: 2077550;  End: 2080699  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001420_01612.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH163 681 923 5.9e-38 0.9402390438247012

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16126 DUF4838 6.65e-51 663 930 1 263
Domain of unknown function (DUF4838). This family consists of several uncharacterized proteins found in various Bacteroides and Chloroflexus species. The function of this family is unknown.
cd14791 GH36 6.72e-10 680 832 96 235
glycosyl hydrolase family 36 (GH36). GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
pfam13229 Beta_helix 1.94e-04 153 304 18 149
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHG92976.1 1.18e-147 457 1030 50 606
QKM66395.1 2.38e-73 468 971 74 571
QTH43149.1 4.09e-29 524 936 65 453
QJD85177.1 6.40e-29 467 958 25 529
QBE61916.1 3.09e-28 1 328 10 328

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V6M_A 5.39e-10 34 115 10 91
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
7V6I_A 2.75e-06 34 118 15 103
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000619 0.998294 0.000501 0.000226 0.000172 0.000167

TMHMM  Annotations      download full data without filtering help

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