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CAZyme Information: MGYG000001406.1_00592

You are here: Home > Sequence: MGYG000001406.1_00592

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Kurthia massiliensis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_A; Planococcaceae; Kurthia; Kurthia massiliensis
CAZyme ID MGYG000001406.1_00592
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1014 MGYG000001406.1_1|CGC5 110744.48 9.8094
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001406.1 3201180 Isolate not provided not provided
Gene Location Start: 622919;  End: 625963  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001406.1_00592.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 713 825 6.9e-20 0.9765625

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01832 Glucosaminidase 1.67e-13 714 787 2 89
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
COG4193 LytD 7.96e-11 601 828 7 230
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
COG1705 FlgJ 1.17e-06 713 834 51 189
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
smart00047 LYZ2 3.64e-04 718 760 21 64
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
NF033202 GW_glycos_SH3 0.002 532 602 9 81
GW domain. The GW domain of Listeria belongs to the clan of SH3-like domains. A similar but broader model (PF13457) occurs in Pfam. The GW domain occurs as repeats on surface proteins of the cell-invading pathogenic bacterium Listeria monocytogenes, and is involved in binding to glycosaminoglycans. Members of this family include the GW-type internalin InlB and several paralogs.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AMA63834.1 8.82e-172 197 1011 38 846
VEI05048.1 5.84e-170 189 1014 30 863
QOV10422.1 8.45e-137 190 1013 25 853
AMX00942.1 3.83e-130 189 1013 33 735
AMX00941.1 1.82e-85 516 1013 19 519

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 9.99e-13 575 818 14 276
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q99V41 3.61e-28 103 834 497 1234
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
Q931U5 3.61e-28 103 834 497 1234
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
A7X0T9 3.63e-28 103 834 504 1241
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=atl PE=3 SV=2
P0C5Z8 3.63e-28 103 834 504 1241
Bifunctional autolysin OS=Staphylococcus aureus OX=1280 GN=atl PE=1 SV=1
Q6GAG0 2.46e-27 103 834 499 1236
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000236 0.999105 0.000173 0.000192 0.000157 0.000137

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001406.1_00592.