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CAZyme Information: MGYG000001385_01639

You are here: Home > Sequence: MGYG000001385_01639

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes_A indistinctus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A; Alistipes_A indistinctus
CAZyme ID MGYG000001385_01639
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
750 MGYG000001385_2|CGC5 84210.51 6.032
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001385 2850981 Isolate not provided not provided
Gene Location Start: 379715;  End: 381967  Strand: -

Full Sequence      Download help

MKKNLFFVLL  LCSVLQGTSQ  TPAEFKSPTN  RYRPKPLWFW  NNTTVTRKGI  DTQLKALKEQ60
AGYGGVSILP  FGAKFGPKYL  SPEYFDLYEY  TAGKAEALGM  QLSLYDEYGF  PSGSGGAIGG120
DDIPRFLNRY  PSLAMKRLDK  IEEEVDGGTV  YHKPASAAGK  LMAVVAMDTA  TKERIDLTDK180
ITEGVIVWKV  PEGRWKIMQF  VCVNDGDPNM  DYLSKDAARA  YVTMTHEQYY  KRFPQYFGTT240
ITETFFDEPT  LYRAKGRVWT  PSFNDEYRAR  YGSSPALYYP  ALWYDIGPET  EAARNALFTL300
RSDLYAEAYP  LTISRWSAAH  GALATGHQDN  EEVENPVGTS  GDLMKCFRYL  DIPGIDKIGT360
WAERPTERFY  KIVSSAAYNW  DHSLVMSETY  GAMGNLPWDS  LYSIAMDQFA  KGINVLIPHA420
AWYDDDNVTF  LPELSSRNPL  YADGLYDFNT  FLGRMHTILQ  NEDRFVAEIA  VLYPIHTMQG480
DHRFDGPLDP  YQGGVEIPYL  DYVQLGQMLT  DGLGRDFEWL  HPEVLADRCT  VGKRGTLDLS540
GTKQYNSFHT  LIIPASKTIS  VSTLNQAAAL  YEAGGKVIFT  SQLPTRSAEA  GADDWVVTLM600
GELLPQAAQG  VYRNRNKNGG  EVLFIEHPDL  QTLSLALQRT  EPYDVEGIGY  TPAMALAGGK660
ANPGLKGGAV  PLRYIHKERN  GKSIFYFANL  SDEPFDKEIA  LRGKKRFELW  NPHTGETYPV720
AAHYDKKGKE  NITLLRLTLP  RLKSLFLVEK  750

Enzyme Prediction      help

No EC number prediction in MGYG000001385_01639.

CAZyme Signature Domains help

Created with Snap377511215018722526230033737541245048752556260063767571223748GH106
Family Start End Evalue family coverage
GH106 23 748 1.5e-80 0.7803398058252428

CDD Domains      download full data without filtering help

Created with Snap3775112150187225262300337375412450487525562600637675712169720Glyco_hydro_106259326GH25_CH-type
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 4.99e-24 169 720 348 869
alpha-L-rhamnosidase.
cd06412 GH25_CH-type 0.002 259 326 115 170
CH-type (Chalaropsis-type) lysozymes represent one of four functionally-defined classes of peptidoglycan hydrolases (also referred to as endo-N-acetylmuramidases) that cleave bacterial cell wall peptidoglycans. CH-type lysozymes exhibit both lysozyme (acetylmuramidase) and diacetylmuramidase activity. The first member of this family to be described was a muramidase from the fungus Chalaropsis. However, a majority of the CH-type lysozymes are found in bacteriophages and Gram-positive bacteria such as Streptomyces and Clostridium. CH-type lysozymes have a single glycosyl hydrolase family 25 (GH25) domain with an unusual beta/alpha-barrel fold in which the last strand of the barrel is antiparallel to strands beta7 and beta1. Most CH-type lysozymes appear to lack the cell wall-binding domain found in other GH25 muramidases.

CAZyme Hits      help

Created with Snap37751121501872252623003373754124504875255626006376757121750BCG54873.1|GH1066749QGA23530.1|GH1063750QGT72311.1|GH1068748BCG54148.1|GH1069750AWW28862.1|GH106
Hit ID E-Value Query Start Query End Hit Start Hit End
BCG54873.1 0.0 1 750 1 750
QGA23530.1 0.0 6 749 4 730
QGT72311.1 1.38e-248 3 750 2 724
BCG54148.1 6.77e-151 8 748 11 734
AWW28862.1 5.03e-148 9 750 21 754

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap377511215018722526230033737541245048752556260063767571213750sp|T2KNA8|PLH15_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 4.34e-16 13 750 22 739
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000621 0.997459 0.001312 0.000201 0.000198 0.000192

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001385_01639.