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CAZyme Information: MGYG000001382_00956

You are here: Home > Sequence: MGYG000001382_00956

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella tanakaei
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella tanakaei
CAZyme ID MGYG000001382_00956
CAZy Family GH98
CAZyme Description Blood-group-substance endo-1,4-beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
603 MGYG000001382_2|CGC3 67281.04 5.0541
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001382 2482207 Isolate not provided Asia
Gene Location Start: 298657;  End: 300468  Strand: -

Full Sequence      Download help

MDITRRQAVK  SAAFAIGAVA  AAVPVAARAQ  DAAGASSQDA  VMRTRISNTS  PLLLSAVYGN60
TPDSLWWGNT  LEGAWSAVPD  DIKPYTAIEL  HPAKVCKPTS  CIPKDTPELR  AWYKHMLDEA120
QLLGIPVFLV  IMSAGERQTV  PAEWLAEQFE  TYSVLRGAMN  IENYWIYNDD  LPTNAAKYLE180
VCARYGGHFI  WHDHENWFWQ  RVMSNKAFAD  AAAKYPKNLV  IATKNTPIRD  DASTDSIVNG240
MWLTGVCENW  GASMDTWKWW  EKHFTKPFDA  VGTRPRDMRS  YASEPEAMIA  CEMMNVYANG300
GTVYNFECAA  YTFMDNDVAT  PAYLNAIVPF  FRFAIDNPAP  SRKDVLARTK  AVFWEKDGGI360
ESVPDFYKGL  SMDDESLPLY  DSGRYHALPV  IMDRVDEATI  KGLFPGAVIL  TKKSPELARK420
KEHLDSLYTV  AAEGDAFAQR  VGDSWCTYNS  NANENGEQSA  TLPLLVHTCK  SVEVKLQPHS480
YVVVQETPYV  VMLTIQNYVT  DKTAMWELQG  NFDASESWKQ  GELDLTNWLS  SNYCVHPADG540
ALRTTEFSLH  GVGKERPLTD  FTGDGREFSH  EESWDEAKGV  LKVVLKHNGE  VRVLIRAEGA600
PKV603

Enzyme Prediction      help

EC 3.2.1.102

CAZyme Signature Domains help

Created with Snap30609012015018021124127130133136139142245248251254257240340GH98
Family Start End Evalue family coverage
GH98 40 340 2.5e-89 0.9938837920489296

CDD Domains      download full data without filtering help

Created with Snap30609012015018021124127130133136139142245248251254257242339Glyco_hydro_98M342598Glyco_hydro_98C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08306 Glyco_hydro_98M 9.90e-105 42 339 7 328
Glycosyl hydrolase family 98. This domain is the putative catalytic domain of glycosyl hydrolase family 98 proteins.
pfam08307 Glyco_hydro_98C 3.52e-73 342 598 1 270
Glycosyl hydrolase family 98 C-terminal domain. This putative domain is found at the C-terminus of glycosyl hydrolase family 98 proteins. This domain is not expected to form part of the catalytic activity.

CAZyme Hits      help

Created with Snap30609012015018021124127130133136139142245248251254257242599AAY71778.1|CBM47|GH98|3.2.1.10242599ABA33101.1|GH9842599VFH47827.1|CBM47|GH9842599VFI08961.1|CBM47|GH9842599BAX33976.1|CBM47|GH98
Hit ID E-Value Query Start Query End Hit Start Hit End
AAY71778.1 2.97e-262 42 599 8 564
ABA33101.1 2.97e-262 42 599 8 564
VFH47827.1 3.94e-262 42 599 37 593
VFI08961.1 7.34e-259 42 599 37 593
BAX33976.1 1.04e-258 42 599 37 593

PDB Hits      download full data without filtering help

Created with Snap306090120150180211241271301331361391422452482512542572425952WMF_A425952WMH_A425952WMG_A435912WMI_A435912WMI_B
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2WMF_A 3.35e-263 42 595 29 581
Crystalstructure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae TIGR4 (Sp4GH98) in its native form. [Streptococcus pneumoniae TIGR4]
2WMH_A 3.35e-263 42 595 29 581
Crystalstructure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae TIGR4 in complex with the H- disaccharide blood group antigen. [Streptococcus pneumoniae TIGR4]
2WMG_A 2.73e-262 42 595 29 581
Crystalstructure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae TIGR4 (Sp4GH98) in complex with the LewisY pentasaccharide blood group antigen. [Streptococcus pneumoniae TIGR4]
2WMI_A 1.14e-93 43 591 28 600
Crystalstructure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 in complex with the A-trisaccharide blood group antigen. [Streptococcus pneumoniae SP3-BS71],2WMJ_A Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 (Sp3GH98) in complex with the B-trisaccharide blood group antigen. [Streptococcus pneumoniae SP3-BS71],2WMJ_B Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 (Sp3GH98) in complex with the B-trisaccharide blood group antigen. [Streptococcus pneumoniae SP3-BS71]
2WMI_B 1.59e-93 43 591 28 600
Crystalstructure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 in complex with the A-trisaccharide blood group antigen. [Streptococcus pneumoniae SP3-BS71]

Swiss-Prot Hits      download full data without filtering help

Created with Snap30609012015018021124127130133136139142245248251254257243591sp|Q6RUF5|EABC_CLOPF
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q6RUF5 1.35e-99 43 591 221 793
Blood-group-substance endo-1,4-beta-galactosidase OS=Clostridium perfringens OX=1502 GN=eabC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as TAT

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 0.000000 0.999978 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001382_00956.