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CAZyme Information: MGYG000001380_03008
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus_B gnavus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Ruminococcus_B; Ruminococcus_B gnavus | |||||||||||
| CAZyme ID | MGYG000001380_03008 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 67382; End: 71569 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 1082 | 1298 | 7.8e-32 | 0.8888888888888888 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam13347 | MFS_2 | 1.98e-40 | 1 | 259 | 175 | 427 | MFS/sugar transport protein. This family is part of the major facilitator superfamily of membrane transport proteins. |
| cd17332 | MFS_MelB_like | 1.61e-34 | 1 | 259 | 176 | 424 | Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. |
| COG2211 | MelB | 1.60e-30 | 1 | 279 | 189 | 461 | Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism]. |
| PRK15098 | PRK15098 | 9.79e-25 | 450 | 880 | 393 | 741 | beta-glucosidase BglX. |
| pfam01915 | Glyco_hydro_3_C | 2.77e-19 | 453 | 705 | 2 | 198 | Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRT30388.1 | 0.0 | 360 | 1395 | 1 | 1036 |
| QHB24155.1 | 0.0 | 360 | 1395 | 1 | 1036 |
| QEI31656.1 | 0.0 | 360 | 1395 | 1 | 1036 |
| CBL22609.1 | 0.0 | 371 | 1394 | 4 | 1021 |
| QOL34539.1 | 9.87e-272 | 371 | 1391 | 4 | 1009 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5WUG_A | 6.49e-47 | 450 | 1300 | 46 | 766 | Expression,characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii [Paenibacillus barengoltzii],5WVP_A Expression, characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii [Paenibacillus barengoltzii] |
| 2X40_A | 2.32e-20 | 1118 | 1282 | 84 | 248 | Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with glycerol [Thermotoga neapolitana DSM 4359],2X41_A Structure of beta-glucosidase 3B from Thermotoga neapolitana in complex with glucose [Thermotoga neapolitana DSM 4359] |
| 2X42_A | 1.59e-19 | 1118 | 1273 | 84 | 239 | Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with alpha-D-glucose [Thermotoga neapolitana DSM 4359] |
| 4I3G_A | 2.98e-16 | 1020 | 1278 | 32 | 276 | CrystalStructure of DesR, a beta-glucosidase from Streptomyces venezuelae in complex with D-glucose. [Streptomyces venezuelae],4I3G_B Crystal Structure of DesR, a beta-glucosidase from Streptomyces venezuelae in complex with D-glucose. [Streptomyces venezuelae] |
| 7MS2_A | 4.76e-16 | 1040 | 1277 | 8 | 232 | ChainA, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P15885 | 4.16e-50 | 447 | 1310 | 16 | 739 | Beta-glucosidase OS=Ruminococcus albus OX=1264 PE=3 SV=1 |
| P16084 | 1.53e-44 | 450 | 1277 | 38 | 770 | Beta-glucosidase A OS=Butyrivibrio fibrisolvens OX=831 GN=bglA PE=3 SV=1 |
| Q2U9M7 | 6.63e-20 | 583 | 910 | 541 | 812 | Probable beta-glucosidase H OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=bglH PE=3 SV=2 |
| B8NPL7 | 6.63e-20 | 583 | 910 | 541 | 812 | Probable beta-glucosidase H OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=bglH PE=3 SV=1 |
| Q5B6C7 | 1.78e-18 | 676 | 905 | 633 | 815 | Probable beta-glucosidase H OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=bglH PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000017 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 45 | 67 |
| 89 | 111 |
| 124 | 143 |
| 148 | 170 |
| 191 | 213 |
| 233 | 255 |
| 374 | 396 |
| 1367 | 1386 |