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CAZyme Information: MGYG000001376_02410

You are here: Home > Sequence: MGYG000001376_02410

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dysgonomonas gadei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas gadei
CAZyme ID MGYG000001376_02410
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
466 MGYG000001376_6|CGC2 52971.9 5.1203
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001376 5166013 Isolate not provided not provided
Gene Location Start: 51356;  End: 52756  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001376_02410.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 195 447 5.2e-41 0.7353846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 7.52e-09 221 453 246 426
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.66e-07 177 445 51 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 0.001 221 445 200 410
polygalacturonase ADPG
PLN02793 PLN02793 0.002 213 317 227 334
Probable polygalacturonase
pfam13229 Beta_helix 0.002 215 309 48 134
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SCV09027.1 4.97e-199 23 466 20 462
ALJ44694.1 4.97e-199 23 466 20 462
QRQ56374.1 4.97e-199 23 466 20 462
AII64640.1 6.81e-199 23 466 19 461
ALJ62050.1 6.81e-199 38 466 33 461

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.026346 0.972218 0.000579 0.000276 0.000264 0.000302

TMHMM  Annotations      download full data without filtering help

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