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CAZyme Information: MGYG000001372_02479

You are here: Home > Sequence: MGYG000001372_02479

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paraprevotella xylaniphila
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella; Paraprevotella xylaniphila
CAZyme ID MGYG000001372_02479
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
934 MGYG000001372_75|CGC3 104906.28 4.7066
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001372 3789432 Isolate not provided not provided
Gene Location Start: 103332;  End: 106136  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001372_02479.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 401 535 7.4e-19 0.6968085106382979

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13385 Laminin_G_3 1.67e-33 681 835 1 151
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
pfam14200 RicinB_lectin_2 2.95e-14 436 520 4 88
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 6.33e-10 486 538 1 58
Ricin-type beta-trefoil lectin domain-like.
pfam00652 Ricin_B_lectin 3.24e-09 454 538 4 88
Ricin-type beta-trefoil lectin domain.
pfam00652 Ricin_B_lectin 1.24e-08 404 532 2 126
Ricin-type beta-trefoil lectin domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ60208.1 0.0 2 933 13 940
QUT88791.1 0.0 8 933 19 940
ASB47762.1 7.99e-300 24 917 31 917
APZ45922.1 7.83e-239 27 933 26 930
AUC19784.1 7.83e-239 27 933 26 930

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4QVS_A 6.66e-22 645 844 24 226
ChainA, S-layer domain-containing protein [Acetivibrio thermocellus ATCC 27405]
5HON_A 2.66e-10 640 838 5 205
Structureof Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose [Geobacillus stearothermophilus],5HON_B Structure of Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose [Geobacillus stearothermophilus]
5HO0_A 2.25e-09 621 838 608 844
Crystalstructure of AbnA (closed conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5HO2_A Crystal structure of AbnA (open conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5HOF_A Crystal structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinopentaose [Geobacillus stearothermophilus],5HP6_A Structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus (a new conformational state) [Geobacillus stearothermophilus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000515 0.998558 0.000263 0.000249 0.000208 0.000194

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001372_02479.