CAZyme Information: MGYG000001370_01661

Basic Information

• Species: Bacteroides fluxus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides fluxus
• CAZyme ID: MGYG000001370_01661
• CAZy Family: GH110
• CAZyme Description: Alpha-1,3-galactosidase B

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
595	MGYG000001370_29|CGC2	67430.47	7.1121

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001370	4330086	Isolate	not provided	not provided

• Gene Location: Start: 56108; End: 57895 Strand: -

Full Sequence      

MNLNKVACLCLLMASCLSNLNGAERTYDLAQMGLKADSKKNASPILQRVINRIKAECNPE
DSIILRFTEGKYFFHETGSAVRTYYISNHDQTNPKKVGIELEGFKHFTLEGNGAELIFHG
RMLPLALLHSENCTLRNFSIDFANPHISQVRIVENDAEKGITFEPAPWVKWRISKDSVFE
AYGKGWDARPSSGIAFEKENRHIVYNTSDLFFSTKEVTATKDGILTAPHWKDSRLIPGTV
VAMRTWYRPAPGIFLHHNRNTVLENVKVHYAEGMGLLAQLCENITLQSFGVCLKGTDDPR
YFTTQADATHFSGCKGKIVSCNGLYEGMMDDAINIHGTYLKVTKRIDDHTLIGRYMHNQS
WGFEWGEPGDSIQFVRSKTMDIQGRPNSITAISPADRSETAGVREFKITFRDPIDPQISE
QEGYGIENLTWTPEVEFKGNIIRNNRARGTLFSTPQKVVVEDNLFDHTSGAAILLCGDCN
GWYETGACRNVVIRKNRFVNALTNQFQFTNAVISIYPEIPDLDGQQRYFHGGKEGSILIE
ENEFDTFDAPILYAKSVDGLIFRHNVIKKNNEYKPFHWNQSRFLLEKVNRVKIVE

Enzyme Prediction     

EC	3.2.1.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH110	27	594	1.4e-222	0.9927007299270073

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	0.007	418	500	64	136	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ADV44857.1	0.0	25	595	24	594
AUI45409.1	0.0	9	595	9	595
CUA17494.1	0.0	9	595	9	595
QKH84934.1	0.0	9	595	9	595
QLK82307.1	0.0	9	595	9	595

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7JW4_A	6.35e-75	18	593	19	592	Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A	3.36e-74	18	593	19	592	Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q64XV2	0.0	9	595	9	595	Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaB PE=3 SV=1
Q5LGZ8	0.0	9	595	9	595	Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaB PE=1 SV=1
A6KWM0	0.0	23	595	20	592	Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB1 PE=3 SV=1
A6L2M8	8.44e-277	25	593	22	590	Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB2 PE=3 SV=1
A6LFT2	4.28e-269	12	593	11	588	Alpha-1,3-galactosidase B OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=glaB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000394	0.943379	0.055547	0.000235	0.000225	0.000205

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001370_01661.