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CAZyme Information: MGYG000001368_03929

You are here: Home > Sequence: MGYG000001368_03929

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Muricomes fissicatena_A
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Muricomes; Muricomes fissicatena_A
CAZyme ID MGYG000001368_03929
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2227 MGYG000001368_11|CGC2 240696.16 4.535
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001368 5374587 Isolate not provided not provided
Gene Location Start: 72984;  End: 79667  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001368_03929.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 36 623 5e-91 0.6063829787234043
CBM51 1537 1682 4.3e-37 0.9850746268656716
CBM32 1029 1158 7.8e-18 0.9435483870967742

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 2.54e-48 40 525 9 470
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam08305 NPCBM 5.98e-40 1537 1683 4 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 1.28e-32 1537 1682 6 144
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
PRK10340 ebgA 5.51e-31 31 499 29 485
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK10150 PRK10150 5.84e-31 97 530 62 480
beta-D-glucuronidase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU95891.1 3.16e-141 1 845 1 802
QUT29155.1 1.71e-140 1 845 1 802
CBK65668.1 4.36e-140 1 872 1 833
QGT70023.1 4.36e-140 1 874 1 835
ALJ42138.1 7.69e-140 1 845 1 800

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4YPJ_A 3.09e-68 34 860 1 807
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
6HPD_A 1.49e-62 41 858 35 802
Thestructure of a beta-glucuronidase from glycoside hydrolase family 2 [Formosa agariphila KMM 3901]
7CWD_A 1.94e-61 43 860 3 801
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]
5T98_A 7.13e-60 44 861 28 821
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]
6B6L_A 2.90e-59 45 859 9 776
Thecrystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838],6B6L_B The crystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P77989 9.69e-75 41 848 3 725
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
T2KN75 7.46e-62 41 858 26 793
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1
A7LXS9 3.10e-60 30 862 31 850
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1
P26257 6.24e-59 41 811 2 706
Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1
T2KPJ7 1.08e-49 40 641 50 638
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000257 0.999046 0.000185 0.000170 0.000161 0.000146

TMHMM  Annotations      download full data without filtering help

start end
5 23
2203 2222