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CAZyme Information: MGYG000001346_01013

You are here: Home > Sequence: MGYG000001346_01013

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides uniformis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides uniformis
CAZyme ID MGYG000001346_01013
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
485 MGYG000001346_13|CGC11 54122.77 8.1014
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001346 4452540 Isolate not provided not provided
Gene Location Start: 543378;  End: 544835  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001346_01013.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 188 451 1.3e-32 0.7692307692307693

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00295 Glyco_hydro_28 1.62e-04 227 418 100 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
COG5434 Pgu1 0.003 164 384 198 392
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUU00182.1 0.0 1 485 1 485
QUT34116.1 0.0 1 485 1 485
QEW35608.1 2.32e-281 1 485 1 477
QJR65187.1 2.70e-280 1 485 1 477
QJR73783.1 2.70e-280 1 485 1 477

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000332 0.998917 0.000246 0.000173 0.000154 0.000146

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001346_01013.