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CAZyme Information: MGYG000001313_02580

You are here: Home > Sequence: MGYG000001313_02580

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides eggerthii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides eggerthii
CAZyme ID MGYG000001313_02580
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
467 MGYG000001313_19|CGC12 51162.58 6.4907
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001313 4157999 Isolate not provided not provided
Gene Location Start: 913521;  End: 914924  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001313_02580.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 47 378 1.4e-61 0.9107692307692308

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.22e-57 22 328 83 413
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 2.47e-12 23 319 69 351
polygalacturonase ADPG
PLN02188 PLN02188 4.94e-09 22 225 37 231
polygalacturonase/glycoside hydrolase family protein
PLN03003 PLN03003 5.35e-09 7 357 12 336
Probable polygalacturonase At3g15720
PLN02793 PLN02793 1.31e-07 24 238 55 267
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRQ48165.1 0.0 1 467 1 467
QUT46230.1 0.0 1 467 1 467
AXY78586.1 2.72e-155 19 466 25 472
ACU05310.1 1.71e-147 14 451 20 458
ANE51485.1 1.65e-144 8 440 8 440

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 9.47e-28 21 309 44 356
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 7.78e-27 21 311 27 350
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
4MXN_A 8.45e-20 21 213 21 210
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
2UVE_A 8.33e-18 23 170 158 310
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
3ZPP_A 1.74e-07 23 171 25 172
Structureof the Streptococcus pneumoniae surface protein and adhesin PfbA [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 4.69e-23 14 375 55 421
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P15922 7.99e-17 23 310 153 490
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
Q8RY29 2.56e-10 23 319 69 351
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
P35338 1.31e-09 22 388 41 378
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1
P26216 1.31e-09 22 382 41 372
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000230 0.999122 0.000167 0.000160 0.000152 0.000150

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001313_02580.