Species | Phocaeicola coprocola | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprocola | |||||||||||
CAZyme ID | MGYG000001306_02714 | |||||||||||
CAZy Family | GH29 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 169095; End: 170930 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH29 | 54 | 374 | 2.5e-82 | 0.8641618497109826 |
CBM32 | 481 | 590 | 4e-17 | 0.7419354838709677 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG3669 | AfuC | 7.41e-75 | 53 | 473 | 11 | 424 | Alpha-L-fucosidase [Carbohydrate transport and metabolism]. |
pfam01120 | Alpha_L_fucos | 2.11e-37 | 91 | 372 | 79 | 327 | Alpha-L-fucosidase. |
smart00812 | Alpha_L_fucos | 1.52e-31 | 90 | 369 | 75 | 326 | Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. |
pfam00754 | F5_F8_type_C | 2.86e-13 | 484 | 601 | 17 | 127 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
cd00057 | FA58C | 6.81e-06 | 509 | 602 | 48 | 143 | Substituted updates: Jan 31, 2002 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QRP58722.1 | 0.0 | 4 | 605 | 1 | 603 |
QQT79395.1 | 0.0 | 4 | 605 | 1 | 603 |
ASM67352.1 | 0.0 | 4 | 605 | 1 | 603 |
QUU10050.1 | 0.0 | 4 | 605 | 1 | 603 |
QIU96866.1 | 0.0 | 4 | 603 | 1 | 601 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
4ZRX_A | 0.0 | 23 | 606 | 2 | 585 | Crystalstructure of a putative alpha-L-fucosidase (BACOVA_04357) from Bacteroides ovatus ATCC 8483 at 1.59 A resolution [Bacteroides ovatus ATCC 8483] |
3UES_A | 6.86e-142 | 49 | 478 | 15 | 475 | Crystalstructure of alpha-1,3/4-fucosidase from Bifidobacterium longum subsp. infantis complexed with deoxyfuconojirimycin [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088],3UES_B Crystal structure of alpha-1,3/4-fucosidase from Bifidobacterium longum subsp. infantis complexed with deoxyfuconojirimycin [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088] |
3MO4_A | 6.61e-140 | 49 | 478 | 17 | 477 | Thecrystal structure of an alpha-(1-3,4)-fucosidase from Bifidobacterium longum subsp. infantis ATCC 15697 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088],3MO4_B The crystal structure of an alpha-(1-3,4)-fucosidase from Bifidobacterium longum subsp. infantis ATCC 15697 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088] |
3UET_A | 8.75e-140 | 49 | 478 | 15 | 475 | Crystalstructure of alpha-1,3/4-fucosidase from Bifidobacterium longum subsp. infantis D172A/E217A mutant complexed with lacto-N-fucopentaose II [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088],3UET_B Crystal structure of alpha-1,3/4-fucosidase from Bifidobacterium longum subsp. infantis D172A/E217A mutant complexed with lacto-N-fucopentaose II [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088] |
5K9H_A | 1.93e-130 | 52 | 586 | 38 | 567 | Crystalstructure of a glycoside hydrolase 29 family member from an unknown rumen bacterium [unidentified] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q8GW72 | 2.97e-121 | 34 | 479 | 19 | 477 | Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2 |
Q7XUR3 | 2.21e-114 | 52 | 470 | 39 | 467 | Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2 |
P49713 | 2.31e-12 | 78 | 431 | 82 | 401 | Putative alpha-L-fucosidase OS=Caenorhabditis elegans OX=6239 GN=W03G11.3 PE=3 SV=2 |
Q6AYS4 | 1.84e-09 | 60 | 210 | 70 | 224 | Plasma alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca2 PE=2 SV=1 |
Q99KR8 | 4.29e-09 | 60 | 210 | 72 | 226 | Plasma alpha-L-fucosidase OS=Mus musculus OX=10090 GN=Fuca2 PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000204 | 0.999184 | 0.000156 | 0.000157 | 0.000143 | 0.000132 |
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