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CAZyme Information: MGYG000001306_00358
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phocaeicola coprocola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprocola | |||||||||||
| CAZyme ID | MGYG000001306_00358 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Xylan 1,4-beta-xylosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 98618; End: 101215 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 60 | 305 | 2.5e-70 | 0.9814814814814815 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK15098 | PRK15098 | 1.86e-128 | 8 | 830 | 6 | 734 | beta-glucosidase BglX. |
| PLN03080 | PLN03080 | 9.76e-128 | 18 | 822 | 33 | 743 | Probable beta-xylosidase; Provisional |
| COG1472 | BglX | 2.43e-76 | 29 | 401 | 14 | 366 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| pfam01915 | Glyco_hydro_3_C | 1.69e-52 | 374 | 745 | 1 | 216 | Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| pfam00933 | Glyco_hydro_3 | 3.04e-48 | 63 | 336 | 63 | 316 | Glycosyl hydrolase family 3 N terminal domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADY37431.1 | 0.0 | 1 | 863 | 1 | 863 |
| ALJ60264.1 | 0.0 | 1 | 863 | 1 | 862 |
| QUT88743.1 | 0.0 | 1 | 863 | 1 | 862 |
| EDV05842.1 | 0.0 | 1 | 863 | 17 | 878 |
| QDO68481.1 | 0.0 | 1 | 863 | 1 | 862 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7VC7_A | 1.78e-95 | 29 | 821 | 17 | 692 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 7VC6_A | 1.78e-95 | 29 | 821 | 17 | 692 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 6Q7I_A | 1.00e-81 | 26 | 845 | 41 | 737 | GH3exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4] |
| 5Z87_A | 6.98e-81 | 51 | 861 | 108 | 784 | ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus] |
| 6R5I_A | 1.15e-77 | 83 | 831 | 83 | 703 | ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D5EY15 | 1.03e-308 | 9 | 861 | 13 | 859 | Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1 |
| Q94KD8 | 1.37e-105 | 36 | 865 | 53 | 767 | Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1 |
| Q4WFI6 | 1.60e-102 | 29 | 817 | 44 | 711 | Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=bxlB PE=3 SV=1 |
| B0Y0I4 | 1.60e-102 | 29 | 817 | 44 | 711 | Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=bxlB PE=3 SV=1 |
| A1DJS5 | 2.29e-101 | 29 | 817 | 44 | 711 | Probable exo-1,4-beta-xylosidase xlnD OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xlnD PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000338 | 0.998964 | 0.000207 | 0.000172 | 0.000168 | 0.000151 |