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CAZyme Information: MGYG000001279_03615
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pseudomonas_E fulva | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E fulva | |||||||||||
| CAZyme ID | MGYG000001279_03615 | |||||||||||
| CAZy Family | AA10 | |||||||||||
| CAZyme Description | Chitin-binding protein CbpD | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3707; End: 3979 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA10 | 1 | 87 | 1.7e-27 | 0.5056179775280899 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd21177 | LPMO_AA10 | 1.53e-38 | 1 | 87 | 93 | 180 | lytic polysaccharide monooxygenase (LPMO) auxiliary activity family 10 (AA10). AA10 proteins are copper-dependent lytic polysaccharide monooxygenases (LPMOs), which may act on chitin or cellulose. The family used to be called CBM33. Activities in this family include lytic cellulose monooxygenase (C1-hydroxylating) (EC 1.14.99.54), lytic cellulose monooxygenase (C4-dehydrogenating) (EC 1.14.99.56), lytic chitin monooxygenase (EC 1.14.99.53), and lytic xylan monooxygenase/xylan oxidase (glycosidic bond-cleaving) (EC 1.14.99.-). Also included are viral chitin-binding glycoproteins such as fusolin and spheroidin-like proteins. |
| pfam03067 | LPMO_10 | 7.45e-30 | 1 | 86 | 97 | 186 | Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function. |
| COG3397 | COG3397 | 1.10e-27 | 2 | 88 | 119 | 207 | Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains [General function prediction only]. |
| cd21178 | Fusolin-like | 1.12e-24 | 7 | 88 | 136 | 227 | fusolin and similar proteins. Fusolin is a protein found in spindles of insect poxviruses that resembles the lytic polysaccharide monooxygenases of chitinovorous bacteria and may function to disrupt the chitin-rich peritrophic matrix that protects insects against oral infections. Thus, it is a component of the virus occlusion bodies (which are large proteinaceous polyhedra) that protect the virus from the outside environment for extended periods until they are ingested by insect larvae. |
| PHA03387 | gp37 | 1.26e-24 | 7 | 86 | 160 | 248 | spherodin-like protein; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CRN05341.1 | 8.90e-65 | 1 | 90 | 155 | 244 |
| QPH44858.1 | 8.90e-65 | 1 | 90 | 155 | 244 |
| QPH49932.1 | 8.90e-65 | 1 | 90 | 155 | 244 |
| AVF54323.1 | 3.34e-64 | 1 | 90 | 199 | 288 |
| QDC05907.1 | 3.34e-64 | 1 | 90 | 199 | 288 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4GBO_A | 1.18e-15 | 7 | 89 | 142 | 222 | Structureof T.fusca E7 [Thermobifida fusca],4GBO_B Structure of T.fusca E7 [Thermobifida fusca],5UIZ_A Structure of T.fusca AA10A [Thermobifida fusca],5UIZ_B Structure of T.fusca AA10A [Thermobifida fusca] |
| 4YN2_A | 1.57e-15 | 7 | 88 | 140 | 230 | THEATOMIC STRUCTURE OF WISEANA SPP ENTOMOPOXVIRUS (WSEPV) FUSOLIN SPINDLES [unidentified entomopoxvirus] |
| 6NDQ_A | 3.26e-13 | 7 | 89 | 106 | 186 | Crystalstructure of a LPMO from Kitasatospora papulosa [[Kitasatospora] papulosa],6NDQ_B Crystal structure of a LPMO from Kitasatospora papulosa [[Kitasatospora] papulosa] |
| 5OPF_A | 9.24e-13 | 7 | 88 | 106 | 193 | Structureof LPMO10B from from Micromonospora aurantiaca [Micromonospora aurantiaca ATCC 27029] |
| 4X27_A | 1.14e-12 | 7 | 86 | 142 | 231 | Structuralbasis for the enhancement of virulence by entomopoxvirus fusolin and its in vivo crystallization into viral spindles (complex with Copper) [Entomopoxvirinae],4X29_A Structural basis for the enhancement of virulence by entomopoxvirus fusolin and its in vivo crystallization into viral spindles (complex with Zinc) [Entomopoxvirinae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q65328 | 5.95e-13 | 7 | 86 | 159 | 246 | Spheroidin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus OX=262177 GN=SLP PE=2 SV=1 |
| P23061 | 1.21e-12 | 7 | 88 | 163 | 254 | Spindolin OS=Choristoneura biennis entomopoxvirus OX=10288 GN=SPH PE=1 SV=1 |
| Q05894 | 1.25e-12 | 7 | 86 | 162 | 251 | Spindolin OS=Heliothis armigera entomopoxvirus OX=10290 PE=1 SV=1 |
| P23058 | 9.79e-12 | 7 | 86 | 160 | 247 | Spheroidin-like protein OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN=SLP PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000057 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |