dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001261_04201

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Basic Information help

Species

Caulobacter sp903900155

Lineage

Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter; Caulobacter sp903900155

CAZyme ID

MGYG000001261_04201

CAZy Family

GH51

CAZyme Description

Intracellular exo-alpha-L-arabinofuranosidase 2

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
523		57523.28	6.8375

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001261	5012197	MAG	Italy	Europe

Gene Location

Start: 1173; End: 2744 Strand: -

Full Sequence Download help

Enzyme Prediction help

EC	3.2.1.55

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH51	26	519	5.4e-120	0.726984126984127

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3534	AbfA	9.92e-160	24	521	1	500	Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism].
pfam06964	Alpha-L-AF_C	8.89e-54	327	513	1	192	Alpha-L-arabinofuranosidase C-terminal domain. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.
smart00813	Alpha-L-AF_C	3.53e-49	327	513	1	189	Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ABF39758.1	6.33e-223	15	520	15	525
BCS34938.1	3.25e-217	11	521	24	542
AMY11940.1	1.19e-215	25	521	31	535
ADU14951.1	7.65e-210	6	521	4	518
AJP72508.1	1.30e-208	29	517	33	525

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6D25_A	5.43e-164	22	520	26	520	Crystalstructure of the GH51 arabinofuranosidase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306],6D25_B Crystal structure of the GH51 arabinofuranosidase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306],6D25_C Crystal structure of the GH51 arabinofuranosidase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306],6D25_D Crystal structure of the GH51 arabinofuranosidase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306],6D25_E Crystal structure of the GH51 arabinofuranosidase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306],6D25_F Crystal structure of the GH51 arabinofuranosidase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]
6ZT6_A	6.24e-149	27	520	5	494	ChainA, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT6_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT6_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT7_A Chain A, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT7_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT7_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus]
2VRQ_A	8.83e-149	27	520	5	494	StructureOf An Inactive Mutant Of Arabinofuranosidase From Thermobacillus Xylanilyticus In Complex With A Pentasaccharide [Thermobacillus xylanilyticus],2VRQ_B Structure Of An Inactive Mutant Of Arabinofuranosidase From Thermobacillus Xylanilyticus In Complex With A Pentasaccharide [Thermobacillus xylanilyticus],2VRQ_C Structure Of An Inactive Mutant Of Arabinofuranosidase From Thermobacillus Xylanilyticus In Complex With A Pentasaccharide [Thermobacillus xylanilyticus]
6ZT8_A	3.55e-148	27	520	5	494	ChainA, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT8_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT8_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT9_A Chain A, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT9_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT9_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus]
6ZTA_A	8.09e-147	27	520	5	494	ChainA, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZTA_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZTA_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P94552	7.42e-139	24	520	3	492	Intracellular exo-alpha-L-arabinofuranosidase 2 OS=Bacillus subtilis (strain 168) OX=224308 GN=abf2 PE=1 SV=2
Q59219	7.95e-135	11	520	8	514	Intracellular exo-alpha-L-arabinofuranosidase OS=Bacteroides ovatus OX=28116 GN=asdII PE=3 SV=1
B0XQB2	1.19e-48	16	517	1	500	Probable alpha-L-arabinofuranosidase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=abfC PE=3 SV=2
Q4WTB3	1.19e-48	16	517	1	500	Probable alpha-L-arabinofuranosidase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=abfC PE=3 SV=2
A1CQC3	1.16e-47	16	517	1	500	Probable alpha-L-arabinofuranosidase C OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=abfC PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000229	0.999131	0.000171	0.000155	0.000153	0.000145

TMHMM Annotations help

There is no transmembrane helices in MGYG000001261_04201.