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CAZyme Information: MGYG000001254_02419

You are here: Home > Sequence: MGYG000001254_02419

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species TF01-11 sp900759665
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; TF01-11; TF01-11 sp900759665
CAZyme ID MGYG000001254_02419
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
719 MGYG000001254_32|CGC1 77080.58 6.0235
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001254 3113115 MAG Austria Europe
Gene Location Start: 31460;  End: 33619  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001254_02419.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 62 569 2.6e-122 0.9824561403508771

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 1.58e-19 63 391 12 357
O-Glycosyl hydrolase family 30.
COG5520 XynC 8.62e-13 191 488 124 400
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADL35667.1 8.69e-150 44 572 88 607
AOZ97766.1 4.80e-146 32 571 50 581
CBK73885.1 5.90e-134 44 572 949 1476
QJU15030.1 8.45e-119 44 571 37 737
ASU27677.1 2.86e-118 44 571 37 737

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4FMV_A 2.53e-09 191 570 89 385
CrystalStructure Analysis of a GH30 Endoxylanase from Clostridium papyrosolvens C71 [Ruminiclostridium papyrosolvens DSM 2782]
7O0E_A 4.90e-08 63 488 13 391
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
7NCX_AAA 5.20e-08 63 488 20 398
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
5CXP_A 7.27e-08 158 570 57 386
X-raycrystallographic protein structure of the glycoside hydrolase family 30 subfamily 8 xylanase, Xyn30A, from Clostridium acetobutylicum [Clostridium acetobutylicum ATCC 824]
4CKQ_A 2.36e-07 163 544 76 407
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQ9_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQB_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQC_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQD_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQE_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q76FP5 3.59e-34 63 571 32 473
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
A0A401ETL2 6.83e-23 8 391 2 445
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1
G2Q1N4 5.73e-09 15 488 1 415
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000151 0.118301 0.881393 0.000060 0.000047 0.000036

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001254_02419.