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CAZyme Information: MGYG000001247_02071

You are here: Home > Sequence: MGYG000001247_02071

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1370 sp900542035
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UMGS1370; UMGS1370 sp900542035
CAZyme ID MGYG000001247_02071
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
519 MGYG000001247_18|CGC3 58686.21 5.1512
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001247 2761406 MAG Austria Europe
Gene Location Start: 36570;  End: 38129  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001247_02071.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 105 466 4.7e-74 0.9230769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.42e-103 53 496 52 524
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 7.96e-31 62 460 54 408
polygalacturonase ADPG
PLN03010 PLN03010 1.32e-29 82 396 48 320
polygalacturonase
PLN02188 PLN02188 1.35e-28 80 492 36 397
polygalacturonase/glycoside hydrolase family protein
PLN03003 PLN03003 1.40e-28 81 396 24 301
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIX91771.1 6.76e-254 1 505 1 507
QJU22750.1 3.18e-252 1 516 1 518
QQR03573.1 9.08e-252 1 505 1 507
ANU47529.1 9.08e-252 1 505 1 507
QRP36832.1 3.68e-251 1 516 1 518

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 6.41e-39 75 368 25 335
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 6.05e-34 75 350 42 325
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
1BHE_A 4.35e-24 97 461 26 362
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
2UVE_A 1.68e-20 17 410 82 514
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
4MR0_A 6.07e-07 77 315 112 357
Crystalstructure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6],4MR0_B Crystal structure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27644 1.35e-57 213 480 15 281
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
A7PZL3 3.50e-42 85 479 67 449
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q8RY29 2.88e-27 80 460 67 408
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
Q9LW07 2.32e-26 81 396 24 301
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
Q02096 1.23e-24 81 485 85 447
Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999938 0.000092 0.000002 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001247_02071.