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CAZyme Information: MGYG000001240_00309

You are here: Home > Sequence: MGYG000001240_00309

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900557405
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900557405
CAZyme ID MGYG000001240_00309
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
591 MGYG000001240_6|CGC1 64788.91 6.7169
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001240 2497614 MAG Austria Europe
Gene Location Start: 15083;  End: 16858  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001240_00309.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 80 279 2.5e-70 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.05e-07 1 222 1 235
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 4.13e-05 78 239 1 170
Amb_all domain.
pfam18884 TSP3_bac 0.008 468 489 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD40778.1 7.15e-253 11 591 6 599
QCP73827.1 7.15e-253 11 591 6 599
QNT67774.1 1.26e-208 22 591 3 587
AGB28243.1 8.79e-189 5 535 3 525
VEH16322.1 1.44e-188 19 569 23 553

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.03e-42 21 515 18 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 3.63e-41 21 515 18 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q0CLG7 8.15e-39 12 515 9 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 2.95e-38 11 515 9 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q5B297 7.76e-38 11 515 8 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000306 0.998975 0.000180 0.000183 0.000170 0.000147

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001240_00309.