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CAZyme Information: MGYG000001186_01491
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Agathobacter sp900547695 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Agathobacter; Agathobacter sp900547695 | |||||||||||
| CAZyme ID | MGYG000001186_01491 | |||||||||||
| CAZy Family | CBM27 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3427; End: 7371 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH26 | 406 | 747 | 6e-56 | 0.9174917491749175 |
| CBM23 | 926 | 1093 | 3.8e-45 | 0.9753086419753086 |
| CBM27 | 229 | 367 | 3.9e-24 | 0.8809523809523809 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam02156 | Glyco_hydro_26 | 1.63e-35 | 427 | 683 | 24 | 263 | Glycosyl hydrolase family 26. |
| COG4124 | ManB2 | 2.47e-17 | 485 | 690 | 103 | 296 | Beta-mannanase [Carbohydrate transport and metabolism]. |
| NF033839 | PspC_subgroup_2 | 1.22e-08 | 1128 | 1307 | 366 | 557 | pneumococcal surface protein PspC, LPXTG-anchored form. The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. |
| NF033609 | MSCRAMM_ClfA | 2.83e-05 | 1106 | 1282 | 19 | 198 | MSCRAMM family adhesin clumping factor ClfA. Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif. |
| NF033598 | elast_bind_EbpS | 3.17e-05 | 1133 | 1244 | 301 | 409 | elastin-binding protein EbpS. The elastin-binding protein EbpS is an adhesin described in Staphylococcus aureus, with orthologs found in many additional staphylococcal species. EbpS is a membrane protein that lacks an N-terminal signal peptide region, has extensive regions low-complexity sequence rich in Asn and Gln, and has a C-terminal LysM domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBK83362.1 | 0.0 | 37 | 1116 | 389 | 1445 |
| CBL07467.1 | 1.20e-305 | 34 | 1116 | 33 | 1073 |
| VCV20359.1 | 2.22e-304 | 34 | 1116 | 33 | 1073 |
| CBL14297.1 | 3.13e-304 | 34 | 1116 | 33 | 1073 |
| EEV00397.1 | 3.21e-304 | 34 | 1116 | 45 | 1085 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4YN5_A | 1.13e-46 | 426 | 776 | 74 | 414 | Catalyticdomain of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase [Bacillus sp. JAMB750] |
| 2BVT_A | 5.01e-41 | 408 | 776 | 11 | 354 | Thestructure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVT_B The structure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVY_A The structure and characterization of a modular endo-beta-1,4-mannanase from Cellulomonas fimi [Cellulomonas fimi] |
| 2X2Y_A | 2.44e-39 | 408 | 776 | 11 | 354 | Cellulomonasfimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi],2X2Y_B Cellulomonas fimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi] |
| 1R7O_A | 3.46e-38 | 384 | 776 | 1 | 379 | CrystalStructure of apo-mannanase 26A from Psudomonas cellulosa [Cellvibrio japonicus] |
| 1J9Y_A | 3.79e-38 | 427 | 776 | 35 | 369 | Crystalstructure of mannanase 26A from Pseudomonas cellulosa [Cellvibrio japonicus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A1A278 | 1.07e-48 | 429 | 1079 | 68 | 686 | Mannan endo-1,4-beta-mannosidase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=BAD_1030 PE=1 SV=1 |
| P49424 | 3.35e-37 | 384 | 776 | 29 | 407 | Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=manA PE=1 SV=2 |
| P55278 | 3.31e-16 | 532 | 648 | 144 | 266 | Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis OX=1423 PE=3 SV=1 |
| O05512 | 2.62e-15 | 492 | 648 | 121 | 268 | Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis (strain 168) OX=224308 GN=gmuG PE=1 SV=2 |
| Q5AWB7 | 1.87e-14 | 545 | 699 | 173 | 311 | Probable mannan endo-1,4-beta-mannosidase E OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=manE PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000305 | 0.998998 | 0.000175 | 0.000199 | 0.000151 | 0.000138 |
