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CAZyme Information: MGYG000001180_02095
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Muribaculum sp001701195 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Muribaculum; Muribaculum sp001701195 | |||||||||||
| CAZyme ID | MGYG000001180_02095 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 223781; End: 225286 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 4.42e-81 | 56 | 470 | 84 | 485 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02218 | PLN02218 | 3.39e-19 | 55 | 458 | 68 | 405 | polygalacturonase ADPG |
| PLN03003 | PLN03003 | 9.22e-17 | 55 | 405 | 24 | 301 | Probable polygalacturonase At3g15720 |
| pfam00295 | Glyco_hydro_28 | 1.70e-16 | 133 | 411 | 30 | 255 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02793 | PLN02793 | 3.04e-12 | 57 | 433 | 55 | 370 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QCD41743.1 | 7.58e-226 | 22 | 482 | 21 | 479 |
| QCP71949.1 | 1.34e-224 | 21 | 491 | 22 | 488 |
| QCD38261.1 | 1.34e-224 | 21 | 491 | 22 | 488 |
| QIM10174.1 | 4.75e-184 | 39 | 501 | 32 | 492 |
| QIK58732.1 | 3.36e-182 | 34 | 498 | 30 | 506 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 4.58e-81 | 45 | 490 | 18 | 439 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 1.61e-64 | 30 | 458 | 20 | 422 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 2UVE_A | 5.25e-34 | 24 | 433 | 129 | 528 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 1BHE_A | 8.97e-18 | 70 | 473 | 22 | 373 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 4MXN_A | 3.91e-13 | 54 | 302 | 21 | 214 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 7.01e-43 | 52 | 458 | 60 | 421 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P15922 | 3.14e-32 | 55 | 433 | 152 | 521 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
| P27644 | 2.83e-29 | 237 | 467 | 25 | 267 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| Q8RY29 | 2.93e-19 | 55 | 454 | 68 | 401 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
| Q9FY19 | 7.93e-18 | 52 | 473 | 57 | 413 | Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000243 | 0.999120 | 0.000157 | 0.000161 | 0.000143 | 0.000133 |