CAZyme Information: MGYG000001157_02440

Basic Information

• Species: Gemmiger sp900540775
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger sp900540775
• CAZyme ID: MGYG000001157_02440
• CAZy Family: CBM66
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
670	MGYG000001157_122|CGC1	77054.34	4.6767

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001157	2792015	MAG	Austria	Europe

• Gene Location: Start: 22365; End: 24377 Strand: +

Full Sequence      

MADTVILFQDDFQSFPIGPLPFDREHSAMGEYHYSPLPGYRGQWYDPIANCNYRGPSWLV
TATDGVHYMEQTRVRNPLTHGVCPVLATGEERWQDYTFTVTLRTLCSNEEAGVLFRYQTS
LMHYAFFMNDNKVQFWRIEKKERTMLAEAPYEYNCDQYYTMRVTCKGNTFTGSINGEKLL
TVQDDRYTYGKVALAAFMPTQYTNVLITTTPEEAARIVECEDAEQARLAEKRSHYPRPKL
YKVIDLKDFGASRQIRFGHLMGGDDWYFVMAQHQKRVFKERYCNISCLTAVNVETGEVLW
QVGEPSTLAVNQDTTCDLPFQIYDINNDGYDEVIFARDFKVMILDGRTGKLLRSMDTPYN
DDPADEILGIEFQKHAFDRLNVDAIRIVNVSGKEHASDILIKDRYARLWVYDENFNLLWK
FTHNNTGHFPYAYDFNGDGKDEIFSCYNMISSDGKLQWELPIDTDHTDEIVIGKFDPDID
EELLAIVSGWEGFMIVDKHGHILARDINGHGQRISVANYCPNMRGLQIATTTYWENQGII
YLYDCKGHEIWHMEPSSNGNVVAPVNWKGDGTELILLNGNVKYGGMLDGDGDRVVLFPDD
GHPDQCAEVLNLTGDPRDEIILWDAHKMYIYTQDRPAPDGPVYHPEKYPEYSASNYRGEF
SFAHWDKAGD

Enzyme Prediction     

No EC number prediction in MGYG000001157_02440.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL11	404	637	1.3e-17	0.3811881188118812
CBM66	86	198	4.6e-16	0.7483870967741936

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd10318	RGL11	6.81e-06	319	637	177	532	Rhamnogalacturonan lyase of the polysaccharide lyase family 11. The rhamnogalacturonan lyase of the polysaccharide lyase family 11 (RGL11) cleaves glycoside bonds in polygalacturonan as well as RG (rhamnogalacturonan) type-I through a beta-elimination reaction. Functionally characterized members of this family, YesW and YesX from Bacillus subtilis, cleave glycoside bonds between rhamnose and galacturonic acid residues in the RG-I region of plant cell wall pectin. YesW and YesX work synergistically, with YesW cleaving the glycoside bond of the RG chain endolytically, and YesX converting the resultant oligosaccharides through an exotype reaction. This domain is sometimes found in architectures with non-catalytic carbohydrate-binding modules (CBMs). There are two types of RG lyases, which both cleave the alpha-1,4 bonds of the RG-I main chain through a beta-elimination reaction, but belong to two structurally unrelated polysaccharide lyase (PL) families, 4 and 11.
COG2319	WD40	1.26e-04	383	622	66	300	WD40 repeat [General function prediction only].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QTQ12956.1	0.0	1	670	1	679
QTQ17316.1	0.0	1	670	1	679
QTQ13071.1	0.0	1	665	2	667
AGC68608.1	0.0	5	665	6	666
ANW98952.1	0.0	5	665	6	666

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000066	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001157_02440.