Species | Duodenibacillus sp900552545 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Duodenibacillus; Duodenibacillus sp900552545 | |||||||||||
CAZyme ID | MGYG000001113_01159 | |||||||||||
CAZy Family | GT9 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 58773; End: 59660 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT9 | 53 | 275 | 2.8e-31 | 0.8666666666666667 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
pfam01075 | Glyco_transf_9 | 4.28e-32 | 54 | 274 | 9 | 228 | Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core. |
cd03789 | GT9_LPS_heptosyltransferase | 1.39e-23 | 111 | 275 | 83 | 242 | lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
COG0859 | RfaF | 1.56e-20 | 64 | 272 | 88 | 294 | ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis]. |
TIGR02195 | heptsyl_trn_II | 8.12e-10 | 14 | 265 | 35 | 287 | lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
PRK10964 | PRK10964 | 2.65e-07 | 173 | 260 | 191 | 284 | lipopolysaccharide heptosyltransferase RfaC. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QDA55160.1 | 1.02e-148 | 1 | 294 | 17 | 311 |
QQS89241.1 | 1.71e-141 | 1 | 295 | 19 | 315 |
BBF22597.1 | 2.07e-134 | 1 | 285 | 18 | 303 |
ANU65198.1 | 1.76e-114 | 1 | 294 | 17 | 310 |
QQQ96353.1 | 1.76e-114 | 1 | 294 | 17 | 310 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
1PSW_A | 4.04e-07 | 40 | 273 | 60 | 305 | Structureof E. coli ADP-heptose lps heptosyltransferase II [Escherichia coli] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P45042 | 1.94e-09 | 18 | 273 | 35 | 305 | ADP-heptose--LPS heptosyltransferase 2 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rfaF PE=3 SV=1 |
P37692 | 2.88e-07 | 18 | 273 | 35 | 305 | ADP-heptose--LPS heptosyltransferase 2 OS=Escherichia coli (strain K12) OX=83333 GN=rfaF PE=1 SV=1 |
P37421 | 2.96e-06 | 18 | 273 | 35 | 305 | ADP-heptose--LPS heptosyltransferase 2 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rfaF PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000062 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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