CAZyme Information: MGYG000001063_05696

Basic Information

• Species: Robinsoniella sp900540475
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
• CAZyme ID: MGYG000001063_05696
• CAZy Family: GH30
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1373	MGYG000001063_146|CGC5	151268.54	4.2219

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001063	7637037	MAG	Sweden	Europe

• Gene Location: Start: 168711; End: 172832 Strand: -

Full Sequence      

MRKKKRFKQAAAGMTALMMGAAAVLSPIAGIPVMAAEVPVMAEGVPVMAAEEPKMTGEIA
VDPDIHYQTLDGWGTSLCWWGNIIGSWGDADWNGNGRADREEIAELAFSPEYLNLNIVRY
NVGGGDKADSSIKRCEGLVPGWTKDMTGTEDGSGDFDSEAFYGKTTEEMSDAGQLWMLEQ
ANKYHYDYAHETGEENTIINKVFSNSPPYYMTKSGTSTGGYWNDSNNLKDDYYDDFAMYL
ARSANWVDQNLKSKFGVGVSYIEPLNEPDTNYWHEGSTKQEGCIFNTGELQSRAYREMLN
AMDAEEFQGNLKDIKITGTDETSLWTAINSFNRLDDDIKKEMDTISAHTYSGSDSERKEL
RQIAEKYDKGLWMSEITRGGGSHYDGSHESMDAANTRSQSEGIMSDLKYMQPTAWIAWLV
ADSEYECLQTNSNWGLIHAVFEKDGQPVPDYHTNLVDGNGNRKDWVPGEGYWAVTKQLYT
MMQYSKYLKAGYTMIDIQDSNMCAAISPEGDELVIVAQNFEGERNTTVDLSAFKNAEAAE
LYRTSDSESCQLAETQDVVDGILDVTLPSNSVSTYIIRSNDGSAICSPGDYAKVVDANVE
KPEEEWTSDLNKFTYTGSWGNSAADFGGGKYTTAPEASAEFTFEGTQAQIYGSQAPEGAV
VNISVDGGEQKEVSLVSDFKEGGVLIYHTGMLEDGKHTITISKAADQDGKLLEISSGRII
NGTLEEKIERIDKSEQVYTVSGVQPILPDTVTARTNMGNKLEKKVIWNLDGIDFTGNVTL
EGTVSETAVKAAVDVQITPENVQYFIDCNNPGSPEYKRVNRYAELFNKTPDQKYEEGSWG
YAEEYGKYDGDINDNYDTGWYAGQGQEIRYTVPVEAGTYRVSMGFKEWWNQDRPMKVSVT
AGEKTTELGTANTWKNNNPWNEEYYEFTCETAGDVTFSVAADKGPDPVLSFIRVQSKLNL
QELKDALAGAAAVDRSQYTQEKLEVLDAAVKAGHPLLYRAGTSQKDAEQSAVQIRQAIED
LSGGGETQEADLTSLRLAVAMAEKLEKQQKENSCFTEESWAAVEEALVLAREVLEKPQVT
QEEVDRAFLKLITLCNLLENDTQKIGLKAVIDGAEAILADEESLAQYTEESAEAVRSALA
EAKRAYTNDGVSQETVNEAARKLMDAVTGLLLKSEDTRLDILIQKAEAILKNEAQYTPSS
IAGLRTALEAAKGIAENSQAGISEINKAYQELAEAMTSLIRKGNKSELKNALDMADQILQ
NSKKYLESSISGLQGLTDEARKVYDDVESDAGRIGEVLKRLIHEILKARLMGDTDLNGVV
DTKDSAELLKYNAELRSFTEEQEQLADVNGDGTADSGDAAVILQYAAEKIVSF

Enzyme Prediction     

No EC number prediction in MGYG000001063_05696.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH30	59	575	2.5e-123	0.9978070175438597

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam14587	Glyco_hydr_30_2	1.08e-22	59	419	4	354	O-Glycosyl hydrolase family 30.
cd14256	Dockerin_I	2.34e-10	1312	1365	2	55	Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
COG5520	XynC	6.44e-10	201	580	117	431	O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
cd14255	Dockerin_III	3.66e-08	1312	1368	1	62	Type III dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. Two specific calcium-dependent interactions between cohesin and dockerin appear to be essential for cellulosome assembly, type I and type II. This subfamily represents the atypical type III dockerins and related domains.
COG1196	Smc	1.08e-07	966	1345	651	989	Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AWY99102.1	0.0	1	1346	1	1332
QIB57138.1	0.0	1	1373	1	1347
QMW80085.1	0.0	1	1373	1	1347
ADL05173.1	6.09e-290	57	1034	42	1270
ASU27677.1	2.06e-128	132	1029	302	1052

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3CLW_A	9.27e-19	61	582	10	501	Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A0A401ETL2	2.16e-29	59	585	37	615	Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1
Q76FP5	5.57e-26	59	536	24	426	Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
E8MGH9	6.40e-07	720	1235	1369	1871	Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000866	0.997824	0.000327	0.000462	0.000264	0.000205

TMHMM  Annotations     

start	end
13	35