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CAZyme Information: MGYG000001063_05674

You are here: Home > Sequence: MGYG000001063_05674

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900540475
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
CAZyme ID MGYG000001063_05674
CAZy Family GH2
CAZyme Description Beta-glucuronidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
632 MGYG000001063_146|CGC4 73034.57 5.2137
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001063 7637037 MAG Sweden Europe
Gene Location Start: 142340;  End: 144238  Strand: +

Full Sequence      Download help

MQSMLYPKTS  RTRRIVDMNG  LWKFCFDPQS  EGLKHNWQNG  LDPRRTIEMP  VPASFNDFFT60
DKESREYTGD  FWYETSVFVP  GEWEGKNISL  RFDCATHRAV  VYINGEKIVT  HEGGFLPFTA120
RINRVVNWNG  YNRVVVCLNN  ELSYATLPAG  STKVFSDGTK  MSKPFFDFYN  YAGLQRPVRL180
VVTPKDEIVD  FSVNHVLEGS  DSITEYAVTT  ASGDVVSAGS  SDVVSADSDH  LVSPVSNIRV240
LIRVYDENRN  LVAEASGEKG  KIRIPNVRLW  EVRNAYLYTF  RILLMDQETI  VDEYEEEIGI300
RTVEVRDTDI  LINNKPVYLK  GFGKHEDSEI  NGRGFNLAVV  KRDFELMKWI  GANSFRTSHY360
PYAEEIIQMA  DREGFLVIDE  VAAVGFFESL  MNFMEASTGK  QTEFFSRDIV  QTETKANHKA420
ALCELIARDK  NHACVIAWSL  MNEPETTSDS  AVPYFKEIFE  LARELDPQKR  PRTFAMVMNS480
TPDACKCYSF  SDILSLNRYY  GWYNRGGYEM  KEAKELFIRE  MDQWKELHLN  KPFLFTEFGA540
DTMVGVHKLP  SVMWSEEYQE  EYLRMQFEVF  DSYDFVKGEQ  VWNFADFQTT  EGIMRVNGNK600
KGIFTRNRQP  KAVAYVFKNR  WENLPQNYKS  IS632

Enzyme Prediction      help

EC 3.2.1.31

CAZyme Signature Domains help

Created with Snap3163941261581892212522843163473794104424745055375686007623GH2
Family Start End Evalue family coverage
GH2 7 623 3.4e-96 0.6210106382978723

CDD Domains      download full data without filtering help

Created with Snap3163941261581892212522843163473794104424745055375686004625PRK101504623LacZ303623Glyco_hydro_2_C73467ebgA18184Glyco_hydro_2_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10150 PRK10150 0.0 4 625 1 596
beta-D-glucuronidase; Provisional
COG3250 LacZ 1.16e-101 4 623 1 597
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 8.54e-72 303 623 1 299
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK10340 ebgA 1.49e-29 73 467 113 468
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02837 Glyco_hydro_2_N 1.35e-21 18 184 4 169
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Created with Snap3163941261581892212522843163473794104424745055375686003630QBE95891.1|GH23630QJU16299.1|GH23630QQQ91196.1|GH23630ANU77864.1|GH23630ASU30672.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QBE95891.1 5.65e-291 3 630 5 605
QJU16299.1 8.02e-291 3 630 5 605
QQQ91196.1 8.02e-291 3 630 5 605
ANU77864.1 8.02e-291 3 630 5 605
ASU30672.1 8.02e-291 3 630 5 605

PDB Hits      download full data without filtering help

Created with Snap31639412615818922125228431634737941044247450553756860026297KGY_A36226JZ1_A26296ED2_A36225Z18_A36226EC6_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7KGY_A 9.34e-258 2 629 4 605
ChainA, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_B Chain B, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_C Chain C, Beta-glucuronidase [Faecalibacterium prausnitzii],7KGY_D Chain D, Beta-glucuronidase [Faecalibacterium prausnitzii]
6JZ1_A 8.70e-245 3 622 5 597
Apostructure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution [[Ruminococcus] gnavus],6JZ1_B Apo structure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution [[Ruminococcus] gnavus],6JZ5_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid [[Ruminococcus] gnavus],6JZ5_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid [[Ruminococcus] gnavus],6JZ6_A b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ6_B b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ7_A b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ7_B b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ8_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone [[Ruminococcus] gnavus],6JZ8_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone [[Ruminococcus] gnavus]
6ED2_A 1.16e-244 2 629 26 627
ChainA, Glycosyl hydrolase family 2, TIM barrel domain protein [Faecalibacterium duncaniae]
5Z18_A 2.03e-244 3 622 29 621
Thecrystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_B The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_C The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_D The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_E The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_F The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z19_A The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_B The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_C The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_D The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_E The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_F The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],6JZ2_A b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution [[Ruminococcus] gnavus],6JZ2_B b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution [[Ruminococcus] gnavus],6JZ3_A b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin [[Ruminococcus] gnavus],6JZ3_B b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin [[Ruminococcus] gnavus],6JZ4_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam [[Ruminococcus] gnavus],6JZ4_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam [[Ruminococcus] gnavus]
6EC6_A 1.59e-243 3 622 28 620
Ruminococcusgnavus Beta-glucuronidase [[Ruminococcus] gnavus],6EC6_B Ruminococcus gnavus Beta-glucuronidase [[Ruminococcus] gnavus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap3163941261581892212522843163473794104424745055375686004624sp|P05804|BGLR_ECOLI4621sp|O77695|BGLR_CHLAE4624sp|O97524|BGLR_FELCA4624sp|Q4FAT7|BGLR_PIG4624sp|O18835|BGLR_CANLF
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P05804 2.33e-161 4 624 1 591
Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2
O77695 5.11e-133 4 621 24 623
Beta-glucuronidase (Fragment) OS=Chlorocebus aethiops OX=9534 GN=GUSB PE=2 SV=1
O97524 1.73e-131 4 624 27 628
Beta-glucuronidase OS=Felis catus OX=9685 GN=GUSB PE=1 SV=1
Q4FAT7 2.52e-131 4 624 28 629
Beta-glucuronidase OS=Sus scrofa OX=9823 GN=GUSB PE=3 SV=1
O18835 9.66e-131 4 624 27 628
Beta-glucuronidase OS=Canis lupus familiaris OX=9615 GN=GUSB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000068 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001063_05674.