CAZyme Information: MGYG000001063_01019

Basic Information

• Species: Robinsoniella sp900540475
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
• CAZyme ID: MGYG000001063_01019
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2217	MGYG000001063_29|CGC2	243200.45	4.6927

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001063	7637037	MAG	Sweden	Europe

• Gene Location: Start: 68721; End: 75374 Strand: -

Full Sequence      

MKLRRRLLSCLLATAVTVTSITPITAAASQGNLQIGSLKVNYLSEPLGIDDAQPIFSWVL
ASDGYDKGQSAYRVIVSSTREGAERHEGDVWDSEKIENQNNYNITYQGNQLLSRTSYYWA
VQVWDEDGNDNGWSAVSSFETGIMSMDEWNGEWVGIKNTDMNFQGANWIWRRDGSDFSGA
PEGVQYFRKGFKTDKTKTISNVNIGITADDEYELFVNGQKAGENGGVDSWKNGKLYDITK
LISAEGENVIAASAHNTSRGYAGLLAKVEVLYNDGTKDTYVTDNSWKLSKTKEEGWSDQN
YNDSGWTNPDQSEPYGNAPWNSGVAPNAENAFAATVLRKEFQAKKGAIKDAKAYVSGLGF
FELKINGQLPDDTLLNPANTQYNQTSLYRVFDVTDLVKEGKNAIGVELGNSFYNETCSVW
NWQDASWRDAPKLRMELEIEYENGEKETVVTDESWKATKEGPITTNSIYYGETYDARKEL
NGFDLVDYDDENWGAVQLMDAPEGKLKAQIMEPIRRTKEMQPSEITKLENGSYVLTIPEM
LAGWVKLDIKGASAGDKVTITYGEKLNADGQVQKLGGKDGVNSGWWPRAYNQQDNYICKG
GEDVETFEPKFSYKGYQYVQVDGYPSELTAEDVTCYRVSNDMEDTGSFESSDELFNKMHQ
MMITTMKNNMQGKPTDTPVWEKNGWLGDANVALETMSYNFGFVNMLKQFVETMEDCQNEF
DNVPNMVPTQGWGNDNTVVWNSIFVFGVDQMIATYGNESYLYEQYDAMRKLALKDIEESR
KNGWTWSDGQLADWVSPMGQGDDDQDLQYSESPSEGSGICGTAFAYHLLDVMADLADRIG
KTGDAAEYRAAMEKMYTAFNEKFYDAENQIYRTLTWSQQQNRSRYRQTSQLVPLAYGLVP
DEYKDGVLTNLVNDIKDKNYHLDTGCVGSKFILPVLTDNGYAEVAYKVAQQKSYPSWGFM
ADRGTSLWEMWETTSRSLGHYFLGTYDEWFYKGIGGIKDMQDGYKTVTIEPALNASLTYA
KTGVNTVRGQLQSDWTLNEDQGVFDIQVPVGTTAEIILPTNDKSQILCNGQALSDTLDGI
HAVTEEAGKVHIEAGSGIYKFETSVKLTSVEKIKLKKAILDAGSLKQLDYEMEAWTEFKA
VLDDAKALNADPDAAQEDVDDMVITLTDATAELKLHVNKSREALKEAVKNADDKANPVAA
PVRYADAYQAAYDAAKAGCTDVALTNEQMDQLVVNLSDAEQEMKSNSFQNLALNGKVTYS
SSHDDLYWGWGSKLINDGDRKNINKDGEYTGYSSNTGDAKSKDHEEWISIDLGAVKDINA
VAIYPAVKNPAEKNSGYGFPKNFDIQVSENGKDWTTVVSKENYPVPGYEPVSFTFGSTNA
KYVKLFARNLNPKSNDHDYYYLQLSEFEVYHSENTVEDIALSSYESPKSTAVYGEPLVDM
ADIKASINGSVNITGKWSVESQDGTAVDLNKKPETGKYNVKLTFQAPNTYIFSNTLAGTA
EDGAKVTVEGSGQKLVYTYLTEVVKAAAPVVEEQKLYFVYAAGGNGEISIADVMKQYQPF
VKFEVGHASDEHKILGSDITVDENGLLSLSVNTDGEIGQTAVIPVTVTMKNYEDTVVNVS
INLTDKIPVTVKSNAKNVIYTGSAYEGLETPSAEITETGEAYTGEFIITYNTEDGSAPVK
EGNYTVTVTPEDPAYAGQWTGSFTISPSLESVEAQIDHPELFWDEEAQVTGVAAIGSDGN
KMNLAGADIAYRSEDTNIAIVDENGKVSARNAGNTKIIVTITIGEMEKSGEFAVTVSEIP
VINPVLASKTTTSVTLETIEGYEYAVQKANTEPVFRHVAEFKDLEPGTAYVFCQRIAATD
THDAGSISEALEVSTDKEKIQGTVILKGTAKEGEKLTLDTTGIKNKKPGDLNITWKRGNQ
EIKGVNGTTYALTKADVGYKISAVVTAENLEGLLTAVTAANVLPSVTPPPAKVEADKVSL
NKSSVSIKKNKSVKLTAQVSPANTADKTITWKSSKSSIASVDKNGKVTAKKAGKVTITAT
TSNGKSASCKITVTTDPTKIKLNASKKTLGRKETYTLKTTLVPSTAVTSKIKFTSSNKKV
AEVDKKGRVKAIKEGTAVITAITANGKKATCDITVKKAPSSIKLNVGKTKTLKKGKTFKL
KVTRSTGSAGNVTFISKNEKVATVSSSGKIKAIKKGKAKITAKTFNGKKADVVITVK

Enzyme Prediction     

No EC number prediction in MGYG000001063_01019.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	525	1058	3.9e-137	0.998015873015873
CBM67	166	320	4e-34	0.9943181818181818
CBM67	331	502	1.4e-32	0.8977272727272727
CBM32	1270	1407	5.4e-18	0.8467741935483871

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	2.84e-88	643	994	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	2.03e-60	346	518	1	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
COG5492	YjdB	6.01e-24	1970	2131	176	329	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam05592	Bac_rhamnosid	2.88e-21	526	639	1	102	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam02368	Big_2	1.98e-13	1978	2051	3	77	Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCI59736.1	0.0	7	1410	11	1406
QYJ14959.1	1.98e-237	31	1101	35	1079
AQS56111.1	2.67e-230	89	1139	14	1057
SDU74751.1	1.26e-212	31	1101	44	1086
QFZ72212.1	9.35e-203	28	1104	31	1069

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3W5M_A	5.93e-144	33	1109	4	1034	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A	1.31e-131	38	1101	35	939	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A	2.16e-84	337	1059	134	847	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
6T0Q_A	3.43e-15	164	328	196	353	PleurotusOstreatus Lectin (POL), apo form [Pleurotus ostreatus]
6T1D_A	3.54e-15	164	328	199	356	PleurotusOstreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_B Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_C Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_D Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_E Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_F Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q82PP4	4.39e-143	33	1101	4	1028	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KPL4	5.17e-114	30	1100	27	946	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
T2KNB2	2.15e-96	46	1107	47	926	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	4.12e-71	322	1061	158	881	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
P33747	5.61e-15	1975	2135	37	201	Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001452	0.976616	0.000504	0.020752	0.000367	0.000278

TMHMM  Annotations     

start	end
7	29