logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001039_00172

You are here: Home > Sequence: MGYG000001039_00172

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900553185
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900553185
CAZyme ID MGYG000001039_00172
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
533 MGYG000001039_11|CGC1 59553.6 4.3577
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001039 3066315 MAG Denmark Europe
Gene Location Start: 10805;  End: 12406  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.38

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 42 530 4.8e-176 0.9958677685950413

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 7.62e-132 40 392 1 357
O-Glycosyl hydrolase family 30.
COG5520 XynC 6.04e-14 43 533 36 430
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT97738.1 7.53e-293 13 533 12 534
QUT61024.1 1.52e-292 13 533 12 534
QQA29541.1 1.52e-292 13 533 12 534
QUT66304.1 1.52e-292 13 533 12 534
QUT34917.1 2.15e-292 13 533 12 534

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 2.73e-75 37 532 1 497
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
6M5Z_A 7.38e-15 37 484 19 408
ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
4CKQ_A 4.36e-13 149 530 91 409
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQ9_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQB_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQC_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQD_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQE_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
4UQA_A 7.72e-13 149 530 91 409
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
7NCX_AAA 1.01e-12 43 530 12 453
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
G2Q1N4 3.09e-12 43 530 29 470
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
Q45070 4.37e-11 32 530 25 419
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
Q6YK37 2.32e-09 32 530 26 420
Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000003 0.001914 0.998118 0.000001 0.000001 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001039_00172.