logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001021_01086

You are here: Home > Sequence: MGYG000001021_01086

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_C sp000980705
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp000980705
CAZyme ID MGYG000001021_01086
CAZy Family GH9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1159 MGYG000001021_19|CGC1 122540.7 4.6775
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001021 2360136 MAG Sweden Europe
Gene Location Start: 40164;  End: 43643  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH9 45 464 2.4e-96 0.9976076555023924
CBM79 928 1037 4.3e-42 0.9727272727272728

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00759 Glyco_hydro_9 1.24e-82 48 463 1 374
Glycosyl hydrolase family 9.
PLN02345 PLN02345 4.30e-41 50 479 2 468
endoglucanase
PLN02613 PLN02613 7.47e-40 33 466 14 478
endoglucanase
PLN00119 PLN00119 2.99e-38 24 466 11 488
endoglucanase
pfam18522 DUF5620 1.75e-35 929 1039 1 119
Domain of unknown function (DUF5620). This is a domain of unknown function predicted to be a carbohydrate binding module.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBL17554.1 1.88e-171 44 482 43 464
CDE33541.1 1.41e-168 1 482 1 473
ERJ89368.1 1.04e-159 843 1157 1 311
EWM53237.1 2.15e-159 44 1155 41 880
AFK82697.1 5.83e-99 45 476 349 778

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2YIK_A 3.19e-92 45 475 39 521
ChainA, Endoglucanase [Acetivibrio thermocellus]
1IA6_A 3.00e-81 45 470 5 430
CrystalStructure Of The Cellulase Cel9m Of C. Cellulolyticum [Ruminiclostridium cellulolyticum],1IA7_A Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticium In Complex With Cellobiose [Ruminiclostridium cellulolyticum]
2XFG_A 6.29e-59 45 470 25 463
ChainA, ENDOGLUCANASE 1 [Acetivibrio thermocellus]
5GXX_A 8.15e-57 45 470 6 429
ChainA, Glucanase [Acetivibrio thermocellus],5GXX_B Chain B, Glucanase [Acetivibrio thermocellus],5GXY_A Chain A, Glucanase [Acetivibrio thermocellus],5GXY_B Chain B, Glucanase [Acetivibrio thermocellus],5GXZ_A Chain A, Glucanase [Acetivibrio thermocellus],5GXZ_B Chain B, Glucanase [Acetivibrio thermocellus]
5GY0_A 4.95e-56 45 470 6 429
ChainA, Glucanase [Acetivibrio thermocellus],5GY0_B Chain B, Glucanase [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q02934 4.11e-56 45 482 77 526
Endoglucanase 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celI PE=1 SV=2
P37700 4.33e-53 45 467 40 472
Endoglucanase G OS=Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=celCCG PE=1 SV=2
P26221 6.97e-50 45 470 51 490
Endoglucanase E-4 OS=Thermobifida fusca OX=2021 GN=celD PE=1 SV=2
P22534 1.09e-49 45 470 27 463
Endoglucanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celA PE=3 SV=2
Q5YLG1 3.08e-48 45 473 48 489
Endoglucanase A OS=Bacillus pumilus OX=1408 GN=eglA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004195 0.989536 0.000688 0.004961 0.000336 0.000256

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001021_01086.