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CAZyme Information: MGYG000001001_01804
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp900540375 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900540375 | |||||||||||
| CAZyme ID | MGYG000001001_01804 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | Endo-polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 17347; End: 18753 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 65 | 411 | 1.4e-69 | 0.9230769230769231 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 4.38e-63 | 39 | 327 | 81 | 396 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02793 | PLN02793 | 1.02e-23 | 43 | 327 | 55 | 328 | Probable polygalacturonase |
| PLN02218 | PLN02218 | 2.54e-21 | 37 | 327 | 64 | 343 | polygalacturonase ADPG |
| pfam00295 | Glyco_hydro_28 | 4.05e-19 | 80 | 408 | 12 | 303 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02188 | PLN02188 | 6.98e-19 | 37 | 326 | 33 | 307 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AGB27557.1 | 9.28e-235 | 18 | 446 | 1 | 431 |
| ADY36938.1 | 1.99e-208 | 16 | 447 | 5 | 438 |
| BCS85558.1 | 4.79e-205 | 46 | 451 | 3 | 409 |
| ADE82966.1 | 1.22e-199 | 19 | 432 | 3 | 416 |
| QVJ79670.1 | 1.73e-199 | 19 | 432 | 3 | 416 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 9.30e-30 | 41 | 352 | 45 | 390 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 5.14e-23 | 45 | 321 | 32 | 343 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 1BHE_A | 5.83e-21 | 49 | 408 | 19 | 361 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 4MXN_A | 1.58e-17 | 41 | 270 | 22 | 235 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
| 2UVE_A | 1.94e-16 | 43 | 248 | 159 | 405 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 4.34e-24 | 43 | 332 | 65 | 364 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P18192 | 1.12e-21 | 49 | 408 | 45 | 387 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| Q949Z1 | 2.04e-21 | 41 | 327 | 80 | 361 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1 |
| Q8RY29 | 4.95e-21 | 39 | 327 | 66 | 343 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
| P26509 | 4.14e-20 | 49 | 408 | 45 | 387 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.002211 | 0.996920 | 0.000257 | 0.000236 | 0.000177 | 0.000165 |
