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CAZyme Information: MGYG000000959_01142

You are here: Home > Sequence: MGYG000000959_01142

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus sp900752785
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus; Ruminococcus sp900752785
CAZyme ID MGYG000000959_01142
CAZy Family GH10
CAZyme Description Endo-1,4-beta-xylanase Y
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1070 MGYG000000959_25|CGC1 118114.36 4.6077
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000959 2365658 MAG Denmark Europe
Gene Location Start: 119;  End: 3331  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8 3.1.1.73

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 192 536 3.5e-76 0.9867986798679867
CE1 842 1065 4.2e-41 0.9647577092511013
CBM22 568 696 3.6e-28 0.9541984732824428

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 2.30e-87 192 535 1 308
Glycosyl hydrolase family 10.
smart00633 Glyco_10 2.97e-73 235 535 2 263
Glycosyl hydrolase family 10.
COG3693 XynA 1.22e-44 197 540 31 342
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
COG2382 Fes 3.67e-22 831 1049 66 278
Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism].
pfam00756 Esterase 2.37e-19 841 1051 1 231
Putative esterase. This family contains Esterase D. However it is not clear if all members of the family have the same function. This family is related to the pfam00135 family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBL17682.1 0.0 1 792 1 786
AEE64768.1 4.26e-284 4 719 5 723
ADU21966.1 8.54e-281 4 719 5 718
AUG56905.1 1.17e-271 1 1007 1 1001
ABN52146.1 2.09e-260 1 995 1 979

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2W5F_A 1.82e-204 34 549 24 538
ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2W5F_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus]
2WYS_A 5.09e-201 34 549 24 538
ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WYS_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_A Chain A, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus]
5CXU_A 1.50e-45 823 1070 17 272
Structureof the CE1 ferulic acid esterase AmCE1/Fae1A, from the anaerobic fungi Anaeromyces mucronatus in the absence of substrate [Anaeromyces mucronatus],5CXX_A Structure of a CE1 ferulic acid esterase, AmCE1/Fae1A, from Anaeromyces mucronatus in complex with Ferulic acid [Anaeromyces mucronatus],5CXX_B Structure of a CE1 ferulic acid esterase, AmCE1/Fae1A, from Anaeromyces mucronatus in complex with Ferulic acid [Anaeromyces mucronatus],5CXX_C Structure of a CE1 ferulic acid esterase, AmCE1/Fae1A, from Anaeromyces mucronatus in complex with Ferulic acid [Anaeromyces mucronatus]
5OFJ_A 4.13e-39 201 513 19 309
Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725]
5OFK_A 2.57e-38 201 513 19 309
Crystalstructure of CbXyn10C variant E140Q/E248Q complexed with xyloheptaose [Caldicellulosiruptor bescii DSM 6725],5OFL_A Crystal structure of CbXyn10C variant E140Q/E248Q complexed with cellohexaose [Caldicellulosiruptor bescii DSM 6725]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P51584 4.19e-261 1 995 1 979
Endo-1,4-beta-xylanase Y OS=Acetivibrio thermocellus OX=1515 GN=xynY PE=1 SV=1
P29126 2.30e-68 185 538 623 952
Bifunctional endo-1,4-beta-xylanase XylA OS=Ruminococcus flavefaciens OX=1265 GN=xynA PE=3 SV=1
Q60042 6.20e-47 34 537 199 687
Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1
P26223 6.34e-47 192 544 3 347
Endo-1,4-beta-xylanase B OS=Butyrivibrio fibrisolvens OX=831 GN=xynB PE=3 SV=1
Q60037 2.72e-43 40 537 207 691
Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000807 0.615267 0.383255 0.000246 0.000209 0.000191

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000959_01142.