You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000000956_01870
You are here: Home > Sequence: MGYG000000956_01870
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Barnesiella sp900538705 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Barnesiellaceae; Barnesiella; Barnesiella sp900538705 | |||||||||||
| CAZyme ID | MGYG000000956_01870 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 63010; End: 64455 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 86 | 276 | 6.5e-75 | 0.994535519125683 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 2.10e-11 | 5 | 233 | 3 | 235 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 3.84e-05 | 95 | 312 | 12 | 190 | Amb_all domain. |
| pfam18884 | TSP3_bac | 0.001 | 424 | 444 | 1 | 21 | Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AKD03746.1 | 6.38e-159 | 2 | 474 | 3 | 461 |
| ALJ00090.1 | 9.37e-150 | 14 | 468 | 54 | 487 |
| ASB47754.1 | 4.24e-148 | 26 | 468 | 42 | 464 |
| AKQ45075.1 | 8.35e-148 | 25 | 468 | 46 | 465 |
| AWK06249.1 | 1.42e-145 | 21 | 467 | 37 | 484 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q5B297 | 3.88e-62 | 24 | 469 | 16 | 412 | Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1 |
| Q0CLG7 | 3.92e-61 | 24 | 470 | 16 | 416 | Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1 |
| B8NQQ7 | 5.49e-61 | 30 | 470 | 22 | 416 | Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1 |
| Q2UB83 | 4.38e-59 | 30 | 470 | 22 | 416 | Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1 |
| A1DPF0 | 1.72e-58 | 12 | 470 | 7 | 417 | Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000388 | 0.998647 | 0.000399 | 0.000203 | 0.000185 | 0.000164 |