logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000853_00945

You are here: Home > Sequence: MGYG000000853_00945

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900549175
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900549175
CAZyme ID MGYG000000853_00945
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
526 MGYG000000853_37|CGC1 57985.58 6.6595
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000853 3157276 MAG China Asia
Gene Location Start: 5109;  End: 6689  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000853_00945.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 75 474 8.1e-72 0.9230769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 5.36e-77 36 499 69 500
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 3.85e-21 49 480 67 423
polygalacturonase ADPG
pfam00295 Glyco_hydro_28 4.66e-21 230 436 85 273
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 9.95e-18 50 402 24 301
Probable polygalacturonase At3g15720
PLN02793 PLN02793 4.80e-15 52 402 55 340
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37923.1 5.44e-138 40 491 40 489
QIK53004.1 1.08e-137 10 512 5 509
QIK53315.1 6.46e-136 31 512 31 510
QIK58732.1 1.83e-135 31 512 31 510
QNT67369.1 2.13e-134 40 523 39 519

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 4.03e-74 40 480 18 420
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 2.94e-47 46 494 41 451
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
2UVE_A 2.14e-17 50 512 157 603
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
1BHE_A 6.02e-16 40 421 6 334
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
4MXN_A 3.75e-11 52 299 24 215
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 1.71e-39 47 485 60 444
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P27644 2.11e-30 233 396 25 186
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
P15922 4.01e-24 50 512 152 597
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
Q8RY29 6.03e-19 49 480 67 423
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
Q9LW07 1.28e-17 50 402 24 301
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000410 0.998880 0.000199 0.000172 0.000162 0.000152

TMHMM  Annotations      download full data without filtering help

start end
7 29