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CAZyme Information: MGYG000000815_01539

You are here: Home > Sequence: MGYG000000815_01539

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dysgonomonas capnocytophagoides
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas capnocytophagoides
CAZyme ID MGYG000000815_01539
CAZy Family GH3
CAZyme Description Xylan 1,4-beta-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
869 MGYG000000815_3|CGC2 96836.48 5.9473
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000815 4510901 MAG China Asia
Gene Location Start: 174396;  End: 177005  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 63 307 5.9e-67 0.9768518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 3.40e-127 12 866 9 765
beta-glucosidase BglX.
PLN03080 PLN03080 3.32e-110 21 867 32 779
Probable beta-xylosidase; Provisional
COG1472 BglX 1.47e-68 54 405 48 366
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 4.06e-52 378 749 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 1.12e-49 51 338 49 316
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY51046.1 0.0 22 863 17 861
QQA31919.1 0.0 29 860 22 855
QUT60853.1 0.0 29 860 22 855
QDO67959.1 0.0 1 863 1 857
QPH59683.1 0.0 29 860 22 855

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5XXL_A 7.69e-90 51 857 67 743
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A 3.96e-89 51 857 67 743
CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
7VC7_A 9.71e-85 19 818 3 685
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 9.71e-85 19 818 3 685
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5TF0_A 3.88e-81 51 856 66 741
CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 5.52e-307 1 865 1 859
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
T2KMH0 3.26e-98 24 865 19 720
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
P33363 1.24e-95 37 855 74 754
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
Q9SGZ5 3.50e-95 34 825 43 730
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
Q56078 9.11e-93 37 855 74 754
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000294 0.998926 0.000301 0.000157 0.000161 0.000148

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000815_01539.