CAZyme Information: MGYG000000815_01322

Basic Information

• Species: Dysgonomonas capnocytophagoides
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas capnocytophagoides
• CAZyme ID: MGYG000000815_01322
• CAZy Family: GH97
• CAZyme Description: Retaining alpha-galactosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
648	MGYG000000815_2|CGC6	73918.56	5.3873

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000815	4510901	MAG	China	Asia

• Gene Location: Start: 291147; End: 293093 Strand: -

Full Sequence      

MRKVLLLAVICLGFSGMYGQRKIELLSPDKAIKLELNISEKIYYSISYDKDILLQDNSLC
LNLKDENLGLNPKLSKERRASVNEILSPIVPLKFSSVKNEYNELSLDFKGGYIVEFRAFN
DGIAYRFVTKKKGDIEILGEDCSINFPKDYLLHLQQPGGFKTAYEEVYTHINSNVWKSSD
KMSVLPVLIDTKDGYKILMSESDLYDYPCMFVKSNGSNSMSSTFPKVPVKFGEDGDRSVK
ILEEAGYIAKTRGDRSFPWRYFVITKEDKTILENTMTYKLASKNIIDDTSWIKPGQVSWE
WWNDASPYGDDVDFVSGYNLDTYKYYIDFASKFGIPYIIMDEGWALSTLDPYTPNPKVDV
HELIRYGKEKNVGIVLWLTWLTVENNMALFKTFADWGVKGVKIDFMDRSDQWMVNFYERV
AVEAAKYQLFVDFHGSFKPAGLEYKYPNVLSYEGVRGMEQMGGCTPDNSIYLPFMRNAVG
PMDYTPGAMISMQPDVYSAQRPNSASIGTRAYQLALFVIFESGLQMLADNPTLYYRNLDC
TEFITQVPTTWDETKVLEAKVGEYAVVAKRKGSIWYIGGMANGSKERTFELNMDFLNTGQ
VYKMTSFEDGINAGRQAMDYRRKESNVVSVDKITIKMVRNGGWAAVLK

Enzyme Prediction     

EC	3.2.1.22

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH97	17	647	6.7e-198	0.9841521394611727

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam10566	Glyco_hydro_97	2.05e-135	288	548	1	278	Glycoside hydrolase 97. This domain is the catalytic region of the bacterial glycosyl-hydrolase family 97. This central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, form two additional non-catalytic domains. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands.
pfam14508	GH97_N	1.35e-72	27	282	1	234	Glycosyl-hydrolase 97 N-terminal. This N-terminal domain of glycosyl-hydrolase-97 contributes part of the active site pocket. It is also important for contact with the catalytic and C-terminal domains of the whole.
pfam14509	GH97_C	1.87e-41	551	648	1	97	Glycosyl-hydrolase 97 C-terminal, oligomerization. Glycosyl-hydrolase-97 is made up of three tightly linked and highly conserved globular domains. The C-terminal domain is found to be necessary for oligomerization of the whole molecule in order to create the active-site pocket and the Ca++-binding site.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QQR18708.1	0.0	1	648	1	648
ANU56448.1	0.0	1	648	1	648
QRM98652.1	0.0	1	648	1	648
QUT27204.1	0.0	1	648	1	648
QNL40956.1	0.0	1	648	1	648

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A24_A	2.18e-150	26	648	5	641	Crystalstructure of BT1871 retaining glycosidase [Bacteroides thetaiotaomicron],3A24_B Crystal structure of BT1871 retaining glycosidase [Bacteroides thetaiotaomicron]
5E1Q_A	3.75e-149	26	648	19	655	Mutant(D415G) GH97 alpha-galactosidase in complex with Gal-Lac [Bacteroides thetaiotaomicron VPI-5482],5E1Q_B Mutant (D415G) GH97 alpha-galactosidase in complex with Gal-Lac [Bacteroides thetaiotaomicron VPI-5482]
2JKA_A	8.01e-56	12	648	1	713	Nativestructure of a family 97 alpha-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],2JKA_B Native structure of a family 97 alpha-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],2JKE_A Structure of a family 97 alpha-glucosidase from Bacteroides thetaiotaomicron in complex with deoxynojirimycin [Bacteroides thetaiotaomicron VPI-5482],2JKE_B Structure of a family 97 alpha-glucosidase from Bacteroides thetaiotaomicron in complex with deoxynojirimycin [Bacteroides thetaiotaomicron VPI-5482],2JKP_A Structure of a family 97 alpha-glucosidase from Bacteroides thetaiotaomicron in complex with castanospermine [Bacteroides thetaiotaomicron VPI-5482],2JKP_B Structure of a family 97 alpha-glucosidase from Bacteroides thetaiotaomicron in complex with castanospermine [Bacteroides thetaiotaomicron VPI-5482]
2D73_A	1.26e-55	16	648	18	724	CrystalStructure Analysis of SusB [Bacteroides thetaiotaomicron VPI-5482],2D73_B Crystal Structure Analysis of SusB [Bacteroides thetaiotaomicron VPI-5482],2ZQ0_A Crystal structure of SusB complexed with acarbose [Bacteroides thetaiotaomicron],2ZQ0_B Crystal structure of SusB complexed with acarbose [Bacteroides thetaiotaomicron]
3WFA_A	1.49e-55	24	648	4	704	Catalyticrole of the calcium ion in GH97 inverting glycoside hydrolase [Bacteroides thetaiotaomicron],3WFA_B Catalytic role of the calcium ion in GH97 inverting glycoside hydrolase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8A6L0	1.28e-151	5	648	7	662	Retaining alpha-galactosidase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=BT_1871 PE=1 SV=1
D7CFN7	6.27e-67	53	646	70	619	Probable retaining alpha-galactosidase OS=Streptomyces bingchenggensis (strain BCW-1) OX=749414 GN=SBI_01652 PE=3 SV=1
G8JZS4	8.25e-57	2	648	4	724	Glucan 1,4-alpha-glucosidase SusB OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=susB PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.020428	0.791297	0.187056	0.000560	0.000329	0.000309

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000815_01322.