Species | RC9 sp900545245 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900545245 | |||||||||||
CAZyme ID | MGYG000000722_02091 | |||||||||||
CAZy Family | GH171 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 8466; End: 9548 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH171 | 68 | 352 | 1.1e-56 | 0.8028169014084507 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG3876 | YbbC | 2.39e-36 | 70 | 352 | 117 | 409 | Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown]. |
cd06814 | PLPDE_III_DSD_D-TA_like_3 | 0.002 | 138 | 254 | 177 | 290 | Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes Similar to D-Serine Dehydratase and D-Threonine Aldolase, Unknown Group 3. This subfamily is composed of uncharacterized bacterial proteins with similarity to eukaryotic D-serine dehydratases (DSD) and D-threonine aldolases (D-TA). DSD catalyzes the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia. D-TA reversibly catalyzes the aldol cleavage of D-threonine into glycine and acetaldehyde, and the synthesis of D-threonine from glycine and acetaldehyde. DSD and D-TA are fold type III PLP-dependent enzymes, similar to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM barrel domain and a C-terminal beta-sandwich domain. AR exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on their similarity to AR, it is possible members of this family also form dimers in solution. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AGH13506.1 | 2.06e-173 | 1 | 360 | 1 | 355 |
AGY53847.1 | 1.08e-84 | 1 | 360 | 1 | 408 |
AXE20063.1 | 8.84e-41 | 9 | 344 | 13 | 382 |
AFK03048.1 | 2.61e-38 | 22 | 294 | 20 | 320 |
AEI48894.1 | 4.49e-38 | 15 | 344 | 15 | 382 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
4K05_A | 1.72e-08 | 70 | 260 | 104 | 298 | Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P40407 | 4.68e-28 | 70 | 352 | 128 | 414 | Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000048 | 0.000008 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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