logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000722_02091

You are here: Home > Sequence: MGYG000000722_02091

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp900545245
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900545245
CAZyme ID MGYG000000722_02091
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
360 MGYG000000722_49|CGC1 40342.2 6.2723
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000722 2915024 MAG Kazakhstan Asia
Gene Location Start: 8466;  End: 9548  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000722_02091.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 68 352 1.1e-56 0.8028169014084507

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3876 YbbC 2.39e-36 70 352 117 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].
cd06814 PLPDE_III_DSD_D-TA_like_3 0.002 138 254 177 290
Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes Similar to D-Serine Dehydratase and D-Threonine Aldolase, Unknown Group 3. This subfamily is composed of uncharacterized bacterial proteins with similarity to eukaryotic D-serine dehydratases (DSD) and D-threonine aldolases (D-TA). DSD catalyzes the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia. D-TA reversibly catalyzes the aldol cleavage of D-threonine into glycine and acetaldehyde, and the synthesis of D-threonine from glycine and acetaldehyde. DSD and D-TA are fold type III PLP-dependent enzymes, similar to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM barrel domain and a C-terminal beta-sandwich domain. AR exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on their similarity to AR, it is possible members of this family also form dimers in solution.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGH13506.1 2.06e-173 1 360 1 355
AGY53847.1 1.08e-84 1 360 1 408
AXE20063.1 8.84e-41 9 344 13 382
AFK03048.1 2.61e-38 22 294 20 320
AEI48894.1 4.49e-38 15 344 15 382

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4K05_A 1.72e-08 70 260 104 298
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 4.68e-28 70 352 128 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000048 0.000008 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000722_02091.