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CAZyme Information: MGYG000000677_00853

You are here: Home > Sequence: MGYG000000677_00853

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Spirochaetota; Spirochaetia; Sphaerochaetales; Sphaerochaetaceae; UBA5920;
CAZyme ID MGYG000000677_00853
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
441 MGYG000000677_43|CGC1 48987.63 4.9578
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000677 2015211 MAG Kazakhstan Asia
Gene Location Start: 2262;  End: 3587  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000677_00853.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 26 399 3.1e-82 0.9261538461538461

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.03e-73 3 441 84 504
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 4.15e-27 2 330 68 355
polygalacturonase ADPG
pfam00295 Glyco_hydro_28 9.93e-27 104 334 61 254
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 2.54e-25 2 337 24 308
Probable polygalacturonase At3g15720
PLN02793 PLN02793 3.14e-25 7 330 58 340
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEC01281.1 2.44e-155 1 432 3 436
ADY14832.1 1.22e-151 4 432 6 436
AEE17954.1 4.93e-150 2 432 4 439
AEV29746.1 4.20e-137 4 433 6 437
QTQ14878.1 4.40e-131 16 432 31 453

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 2.26e-59 2 393 28 411
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 7.13e-43 4 395 47 428
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
1BHE_A 1.36e-28 14 366 22 350
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
2UVE_A 6.66e-20 1 367 156 532
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
1HG8_A 2.82e-06 91 320 64 267
Endopolygalacturonasefrom the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 2.02e-41 7 392 68 424
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P27644 1.09e-39 147 381 9 249
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
Q949Z1 2.43e-29 1 363 79 397
Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1
P18192 3.39e-29 14 366 48 376
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1
P26509 1.09e-27 14 366 48 376
Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000060 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000677_00853.