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CAZyme Information: MGYG000000633_00188

You are here: Home > Sequence: MGYG000000633_00188

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Victivallis sp900768515
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp900768515
CAZyme ID MGYG000000633_00188
CAZy Family PL15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
771 87430.98 8.5239
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000633 2845403 MAG Madagascar Africa
Gene Location Start: 223411;  End: 225726  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000633_00188.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL15 501 632 1.3e-28 0.9850746268656716

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 4.92e-52 33 456 9 448
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 4.37e-09 484 645 3 163
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV74042.1 1.36e-235 26 764 38 784
QDV65465.1 1.49e-210 19 731 78 797
QDU34563.1 7.14e-168 14 759 13 786
QQE12574.1 2.91e-167 33 716 39 742
AXA35159.1 2.13e-111 26 618 61 663

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 2.42e-70 35 719 25 737
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 5.93e-69 35 719 25 737
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]
6LJA_A 1.03e-44 38 719 43 787
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A 2.55e-42 38 719 43 787
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000311 0.999073 0.000161 0.000159 0.000143 0.000136

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000633_00188.