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CAZyme Information: MGYG000000604_02280

You are here: Home > Sequence: MGYG000000604_02280

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1829 sp900549415
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp900549415
CAZyme ID MGYG000000604_02280
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
606 MGYG000000604_16|CGC2 69217.37 8.655
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000604 3604218 MAG Madagascar Africa
Gene Location Start: 66439;  End: 68259  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000604_02280.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 67 211 7.9e-25 0.3851508120649652

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01229 Glyco_hydro_39 2.16e-06 106 188 122 213
Glycosyl hydrolases family 39.
pfam02449 Glyco_hydro_42 3.65e-05 35 135 5 138
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
COG3867 GanB 0.005 44 203 69 255
Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 8.67e-149 14 586 18 590
QDU57372.1 6.53e-102 17 602 22 621
AVM44901.1 1.03e-59 3 525 5 543
AHF90941.1 1.74e-47 17 566 226 805
CCW36010.1 4.65e-29 38 239 42 249

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 2.77e-16 26 239 107 343
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000203 0.999103 0.000199 0.000156 0.000147 0.000139

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000604_02280.