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CAZyme Information: MGYG000000591_01239

You are here: Home > Sequence: MGYG000000591_01239

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phascolarctobacterium_A succinatutens_A
Lineage Bacteria; Firmicutes_C; Negativicutes; Acidaminococcales; Acidaminococcaceae; Phascolarctobacterium_A; Phascolarctobacterium_A succinatutens_A
CAZyme ID MGYG000000591_01239
CAZy Family GH33
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
357 MGYG000000591_16|CGC1 38946.67 4.274
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000591 2471478 MAG Madagascar Africa
Gene Location Start: 23419;  End: 24492  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000591_01239.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH33 34 338 3.5e-28 0.8918128654970761

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13088 BNR_2 4.26e-90 45 334 1 278
BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
COG4692 COG4692 2.81e-61 19 349 21 371
Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis].
cd15482 Sialidase_non-viral 3.33e-46 33 341 13 326
Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.
smart00602 VPS10 0.003 233 352 3 107
VPS10 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTV77693.1 6.16e-244 20 357 1 338
ALS21221.1 3.96e-118 30 352 16 338
AUS95056.1 3.23e-116 34 352 20 334
AZS14954.1 2.35e-104 34 345 20 330
QYR20881.1 4.74e-103 30 350 17 334

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000040 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000591_01239.