CAZyme Information: MGYG000000584_00728

Basic Information

• Species: RC9 sp900544195
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900544195
• CAZyme ID: MGYG000000584_00728
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
949	MGYG000000584_11|CGC1	107627.43	5.9564

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000584	3056711	MAG	Madagascar	Africa

• Gene Location: Start: 5899; End: 8748 Strand: +

Full Sequence      

MKISRFLAAASVVLASLVAFSSESSARTTSKDLYKQFQNPDSRYRPFVRWWWNGDRVEAE
ELVRELHILKDAGVGGVEINPISFPYGADAMDTKPLKWLSDEWIDMLKVVFDEAGRLGMT
CDLIIGSGWPFGAETLPREERASVMLTYAQKVTGGERFEMSKFNIFKNIDPGVTKVNTGR
TPELVSVCLAPDPINDLSEAIDLSGNIEGDVITVDVPKGNWQFYAMVKYDSFACVINGAP
GAAGSILNHMDAEAVRRYLDNMTDTIEARLGPLSKHLRAFFVDSMELEGCNWTSDFPEEF
KARRGYDLMPWLPFTMFKVGRLGNVESFDYGSKKGDKFQDQVNRVRFDFELTKAELLNER
YMNTFLSWCREKGVKSRSQAYGNGFFIEESSLGQDIPEGESWTTNWLKHRIGEEMGDEDY
RRGRAYTMIDKYVSSAAHLTGKRLVSAEEMTNTYKVFTTSLEFLKVGSDMSAISGITHSV
WHGFNYSPLEAEFPGWVQYGTFHNERNTWWPYVNKLNDYRARLSSQLQNADMFTDIAILP
ANYDMWSTMGVQTEPFPVALNIPYTSLIWEAIHKNGGGADYVSEIILRDATIRNGKICYG
PKEYGTLFLVEVTSTTPETLAKLEEFVKGGGRVFCIGKYPEKSLGLKDFEARDKQITETV
ARLKEYKDNFVLLEKPADGKYLEWYTGVMEKYNLPHTLTISNPDRFLLQNQYVTDDGSDM
FLFMNAHMSEARETDIIFPKSVTAGKHAWLYDPASGKRFVLPVGKDGKMHFRFGPSETYL
FVFNKMGGSAPAWKQLPLDGQDEIQVTGGWNLKMHHTWPDSTWTTSLDQLQDFKDMKDTT
FKNFMGEVTYTKTVTLSGKLPKYLNLGKVADICEVWVNGKPAGVKWFGERVYDITGLLRP
GDNTIEVKVTTLMGNYIQTLKDNKVAQRFVIKRKQPYVSAGLIGPVKLY

Enzyme Prediction     

No EC number prediction in MGYG000000584_00728.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	33	949	5.6e-198	0.9963592233009708

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	8.39e-48	196	663	349	779	alpha-L-rhamnosidase.
pfam02837	Glyco_hydro_2_N	6.57e-04	788	949	18	166	Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
pfam08531	Bac_rhamnosid_N	0.002	874	909	17	63	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCG53460.1	0.0	8	949	9	947
AEW20432.1	0.0	29	949	39	956
BAR50761.1	0.0	29	949	39	956
BAR48036.1	0.0	29	949	39	956
BBD44720.1	0.0	32	949	41	954

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q2F_A	9.47e-38	191	948	409	1138	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A	8.92e-24	204	946	378	1096	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A	2.03e-23	204	946	378	1096	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNA8	4.68e-39	32	783	29	738	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000341	0.998914	0.000219	0.000180	0.000167	0.000149

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000584_00728.